Miyakogusa Predicted Gene
- Lj0g3v0271229.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0271229.1 Non Chatacterized Hit- tr|I1M6H3|I1M6H3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,55.56,0.000000000000004,Pectin lyase-like,Pectin lyase
fold/virulence factor; no description,NULL; no description,Pectin
lya,CUFF.17925.1
(561 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76166 361 3e-99
gnl|LJGI|BP075577 weakly similar to UniRef100_A6ZVB7 Cluster: Bn... 278 4e-74
gnl|LJGI|TC65198 similar to UniRef100_O48566 Cluster: CLP protea... 147 9e-35
gnl|LJGI|TC71707 similar to UniRef100_Q06HR0 Cluster: ATP depend... 105 3e-22
gnl|LJGI|BP071975 similar to UniRef100_O48566 Cluster: CLP prote... 72 4e-12
gnl|LJGI|TC73648 weakly similar to UniRef100_A9STS3 Cluster: Pre... 56 2e-07
>gnl|LJGI|TC76166
Length = 733
Score = 361 bits (182), Expect = 3e-99
Identities = 218/230 (94%)
Strand = Plus / Plus
Query: 149 tggatttagcagaagatggacatgacaacagagttaggagctacattagttgggaagatt 208
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tggatttagcaaaaggtggacatgacaacagagttaggagctacattagttgggaagatt 281
Query: 209 tgaaggtggatgagcaaagcttagccttgaagtccaacaatgatgttagagttatcatgg 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tgaaggtggatgagcaaagcttagccttgaagtccaacaatgatgttagagttatcatgg 341
Query: 269 ttgatcagcatggaagggaacattcaaaaactgttcaaggtgcagtggatatggttccag 328
||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 342 ttgatcaacatggaaggggacattcaaaaactgttcaaggtgcagtggatatgcttccag 401
Query: 329 atcacaacacaaaaagggtcaaaatctacatgttcccaggggtttacaga 378
|||||| ||| | |||||||| |||||||| |||||||| |||||||||
Sbjct: 402 atcacactacacagagggtcaacatctacattttcccaggagtttacaga 451
>gnl|LJGI|BP075577 weakly similar to UniRef100_A6ZVB7 Cluster: Bni1-related protein;
n=1; Saccharomyces cerevisiae YJM789|Rep: Bni1-related
protein -, partial (2%)
Length = 416
Score = 278 bits (140), Expect = 4e-74
Identities = 149/152 (98%)
Strand = Plus / Minus
Query: 410 ggcacggctgtgctgtgctctatcaaatttacatgtcttggccgtgccaacaccctacac 469
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 416 ggcacggctgtgctgtgctctatcaaattaccatgtcttggccgtgcccacaccctacac 357
Query: 470 gcccgtgggggctaattcaattgtcacgactattctacttaagaggcaaagtcgtgcata 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gcccgtgggggctaattcaattgtcacgactattctacttaagaggcaaagtcgtgcata 297
Query: 530 ctttcctggcagagagcccgttcctcccataa 561
||||||||||||||||||||||||||||||||
Sbjct: 296 ctttcctggcagagagcccgttcctcccataa 265
>gnl|LJGI|TC65198 similar to UniRef100_O48566 Cluster: CLP protease regulatory
subunit CLPX precursor; n=1; Arabidopsis thaliana|Rep:
CLP protease regulatory subunit CLPX precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (29%)
Length = 808
Score = 147 bits (74), Expect = 9e-35
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 55 gtcctcacagaaccgaagaatgcccttgggaatcaatacaagaagatgttccaaatcaat 114
|||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 191 gtcctcacagaaccaaagaatgctcttgggaagcaatacaagaagatgttccaaatcaat 250
Query: 115 ggagtaaagctacattttacacaaagcgct 144
||||||||||||||||||||| ||||||||
Sbjct: 251 ggagtaaagctacattttacagaaagcgct 280
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 5 ggactggtggtgtcatggattctgatattgcgtcatcattattagaaactgt 56
||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 36 ggactggtggtgtcacagattctgctattgcgtcatcattattagaaactgt 87
>gnl|LJGI|TC71707 similar to UniRef100_Q06HR0 Cluster: ATP dependent Clp protease
ATP-binding subunit ClpX1; n=1; Pennisetum glaucum|Rep:
ATP dependent Clp protease ATP-binding subunit ClpX1 -
Pennisetum americanum (Pearl millet), partial (53%)
Length = 718
Score = 105 bits (53), Expect = 3e-22
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 88 caatacaagaagatgttccaaatcaatggagtaaagctacattttacacaaagcgct 144
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2 caatacaagaagatgttccaaatcaatggagtaaagctacattttacagaaagcgct 58
>gnl|LJGI|BP071975 similar to UniRef100_O48566 Cluster: CLP protease regulatory
subunit CLPX precursor; n=1; Arabidopsis thaliana|Rep:
CLP protease regulatory subunit CLPX precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (16%)
Length = 380
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 5 ggactggtggtgtcatggattctgatattgcgtcatcattattagaaactgt 56
||||||||||||||| ||||||| |||||||||||||| ||||||||||||
Sbjct: 244 ggactggtggtgtcacagattctgctattgcgtcatcataattagaaactgt 295
>gnl|LJGI|TC73648 weakly similar to UniRef100_A9STS3 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(44%)
Length = 1569
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 290 attcaaaaactgttcaaggtgcagtggatatggttccagatcacaacacaaaaagggtca 349
||||||||||||||||||| || || ||| |||||||||| |||||||| |||| |||
Sbjct: 418 attcaaaaactgttcaaggggctgtagatttggttccagaaaacaacacagaaagaatca 477
Query: 350 aaat 353
||||
Sbjct: 478 aaat 481