Miyakogusa Predicted Gene
- Lj0g3v0270749.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0270749.1 tr|G7IX40|G7IX40_MEDTR Pectinesterase OS=Medicago
truncatula GN=MTR_3g033690 PE=3 SV=1,75.31,0,seg,NULL;
Pectinesterase,Pectinesterase, catalytic; PMEI,Pectinesterase
inhibitor; SUBFAMILY NOT NAM,CUFF.17940.1
(1452 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AI967495 similar to UniRef100_A7Q4Y4 Cluster: Chromosom... 682 0.0
gnl|LJGI|BP063167 weakly similar to UniRef100_A7P3R9 Cluster: Ch... 369 e-101
gnl|LJGI|BW598505 weakly similar to UniRef100_A7Q4Y4 Cluster: Ch... 230 2e-59
gnl|LJGI|BP053433 212 5e-54
gnl|LJGI|TC82421 similar to UniRef100_A7Q4Y4 Cluster: Chromosome... 170 2e-41
gnl|LJGI|TC63520 similar to UniRef100_A7QAI4 Cluster: Chromosome... 56 6e-07
>gnl|LJGI|AI967495 similar to UniRef100_A7Q4Y4 Cluster: Chromosome undetermined
scaffold_51, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_51, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(24%)
Length = 348
Score = 682 bits (344), Expect = 0.0
Identities = 347/348 (99%)
Strand = Plus / Plus
Query: 1044 ggttcacgcacaacgccaattttataaacaatgccaaatatatggtactgtggacttaat 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttcacgcacaacgccaattttataaacaatgccaaatatatggtactgtggacttaat 60
Query: 1104 atttggcaatgccgccgtggtttttcagaactgcaagattttcgcaaaaaagcctttaga 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttggcaatgccgccgtggtttttcagaactgcaagattttcgcaaaaaagcctttaga 120
Query: 1164 tggccaagcaaacatgatcacggctcaaggacgagatgacccattccagaacactggaat 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggccaagcaaacatgatcacggctcaaggacgagatgacccattccagaacactggaat 180
Query: 1224 caccatccacaattctgaaatcagggcagcaccggacctcaagcctgtcgttaacaagca 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caccatccacaattctgaaatcagggcagcaccggacctcaagcctgtcgttaacaagca 240
Query: 1284 caacaccttcttgggcaggccctggcagcagtactcaagagtggtggtcttgaaaacttt 1343
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caacacctccttgggcaggccctggcagcagtactcaagagtggtggtcttgaaaacttt 300
Query: 1344 catggacaccttggtgagcccgttgggatggtcttcgtgggatgatac 1391
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catggacaccttggtgagcccgttgggatggtcttcgtgggatgatac 348
>gnl|LJGI|BP063167 weakly similar to UniRef100_A7P3R9 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 444
Score = 369 bits (186), Expect = e-101
Identities = 302/341 (88%), Gaps = 6/341 (1%)
Strand = Plus / Plus
Query: 1 atgggaaatatattcctcacactcttattgttatcttcaattttctcaatagcctcatcc 60
|||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 65 atgggaaatatattcctcacactcttatggttaccttcaattttctcaatagcctcatca 124
Query: 61 agaagaggtcctt------cctccagcaacatagattggtggtgcaaactaaccccacac 114
||||||| |||| ||||||||||||||| |||||||||||| |||||||| |||
Sbjct: 125 agaagagaaccttcaccttcctccagcaacataggttggtggtgcaacctaaccccccac 184
Query: 115 cctgaaccttgcaagcactacattactcaaatcaacccccattccaaaatcaaacacaaa 174
|||||||| ||||| ||||| |||||||| || ||||||||||||| |||||||||||||
Sbjct: 185 cctgaaccatgcaaacactatattactcatatgaacccccattccacaatcaaacacaaa 244
Query: 175 aatgaattccggggaatgcttgtacatttggcattaaaactagcacttggcatgcaaagg 234
| |||||| || ||||||||||| || ||||| ||||||| ||||||| ||||||||||
Sbjct: 245 actgaatttcgaggaatgcttgttcagttggctttaaaacaagcacttaacatgcaaagg 304
Query: 235 gaagcacatgttactctacaaaacatggagacaaagaaacacagaactgtacatggtgat 294
|||||||||| | ||| ||||||||||| ||| | |||||||| |||||||||||||||
Sbjct: 305 gaagcacatgattctcaacaaaacatggtcacagataaacacaggactgtacatggtgat 364
Query: 295 tgtttgaagctgtatggaaacaccatctttcatctcaatcg 335
|||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 365 tgtttgaagctgtatgaaaataccatctttcatctcaatcg 405
>gnl|LJGI|BW598505 weakly similar to UniRef100_A7Q4Y4 Cluster: Chromosome undetermined
scaffold_51, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_51, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 484
Score = 230 bits (116), Expect = 2e-59
Identities = 287/342 (83%), Gaps = 9/342 (2%)
Strand = Plus / Minus
Query: 373 ccagatgatacacagacttggctcgcaacatctctcacaaatatcagaacatgtggaaca 432
|||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 364 ccagttgatacacaaacttggctcacaacagctctcacaaatatcagaacatgtagaaca 305
Query: 433 ggggctgtggaactcaatgctcaagatttcatgtttccaacagagagcagcaatgtcact 492
||||| ||||| ||||||||||||||||||||| | ||||||| ||||| || ||||||
Sbjct: 304 ggggcagtggatctcaatgctcaagatttcatggtgccaacaggaagcagtaacgtcact 245
Query: 493 cagatgataaggaacggcttagccatcaatgcggatttcatgaaatataaagaatcagcg 552
|||||||||||||| ||||||| ||||||| |||||| ||||| | || | |||
Sbjct: 244 gagatgataaggaacagcttagctatcaatgttgatttcctgaaacaaaatgcttca--- 188
Query: 553 gctaaaaattacacctcggaaacaga--aaga-acgtttcccaattggttttccgggcat 609
||| || ||||||| |||||||| |||| |||||| | |||||||| |||||
Sbjct: 187 ---aaatatcacacctcagaaacagaggaagatgtgtttccaagctggttttctaggcat 131
Query: 610 gagaggaaactgttgcagtcttcttccgtaaaggcaaattatgtggtggcaaaagatggt 669
||||||||||| ||||||||||| | || ||| |||||| ||||| ||||||||||||
Sbjct: 130 gagaggaaacttgtgcagtcttctacggtgaagccaaatttggtggtagcaaaagatggt 71
Query: 670 tcaggaaacttcaagactgtccaaggtgctctgaatgcagct 711
|| ||||||| || ||||||||||||||||||||||||||||
Sbjct: 70 tcgggaaactacaggactgtccaaggtgctctgaatgcagct 29
Score = 141 bits (71), Expect = 1e-32
Identities = 109/122 (89%), Gaps = 6/122 (4%)
Strand = Plus / Minus
Query: 1 atgggaaatatattcctcacactcttattgttatcttcaattttctcaatagcctcatcc 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 484 atgggaaatatattcctcacactcttattgttaccttcaattttctcaatagcctcatca 425
Query: 61 agaagag------gtccttcctccagcaacatagattggtggtgcaaactaaccccacac 114
||||||| ||||||||||||||||||| |||||||||||| |||||||| |||
Sbjct: 424 agaagagaaccttcaccttcctccagcaacataggttggtggtgcaacctaaccccccac 365
Query: 115 cc 116
||
Sbjct: 364 cc 363
>gnl|LJGI|BP053433
Length = 436
Score = 212 bits (107), Expect = 5e-54
Identities = 113/115 (98%)
Strand = Plus / Plus
Query: 286 catggtgattgtttgaagctgtatggaaacaccatctttcatctcaatcgcacccatcac 345
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 319 catggtgattgtttgaagctgtatggaaacaccatctttcatctcaatcggacccatcac 378
Query: 346 agccttcatctggagaaagggtcttcaccagatgatacacagacttggctcgcaa 400
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agtcttcatctggagaaagggtcttcaccagatgatacacagacttggctcgcaa 433
>gnl|LJGI|TC82421 similar to UniRef100_A7Q4Y4 Cluster: Chromosome undetermined
scaffold_51, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_51, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(71%)
Length = 1243
Score = 170 bits (86), Expect = 2e-41
Identities = 599/770 (77%)
Strand = Plus / Plus
Query: 595 tggttttccgggcatgagaggaaactgttgcagtcttcttccgtaaaggcaaattatgtg 654
||||||||| ||| |||||||| ||||||||||||||| |||||||| || ||||
Sbjct: 137 tggttttccacgcacgagaggaagctgttgcagtcttctaagataaaggcacatcttgtg 196
Query: 655 gtggcaaaagatggttcaggaaacttcaagactgtccaaggtgctctgaatgcagctgcg 714
||||||||||||||||| || | ||||||||||| |||| |||||| || || ||
Sbjct: 197 gtggcaaaagatggttctgggcatttcaagactgttcaagcagctctggatatggcggca 256
Query: 715 aagagaagatataaaacaaggtttgtgatacatgtgaggaaaggggtgtatagagagaat 774
| |||||| | || || |||||| | |||| ||||| | |||||| || | |||||||
Sbjct: 257 aggagaaggttcaagacgaggtttattatacgtgtgaaaacaggggtttacaaagagaat 316
Query: 775 attgaggttgctgtgaagaatgataacatcatgcttgttggtgatgggatgaaaaacacc 834
|||||||||| | |||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 317 attgaggttgacaaggcgaatgataacatcatgttggttggtgatgggatgaaaaacacc 376
Query: 835 ataattaccagtggcagaagtgttcaagcaggttatactacgtatagctcagccacagca 894
| ||||| ||||| || || ||| || || | ||| || |||||| || ||||||
Sbjct: 377 gtgattacaagtgggaggagcgttagagatggctttaccacctatagcagtgcaacagca 436
Query: 895 ggcatagatggactccacttcattgcacgtgatattaccttccaaaacattgcgggtcct 954
|| || ||||||| ||||||||||||||||| || || ||| | |||| || || |||
Sbjct: 437 ggaattgatggaccgcacttcattgcacgtgacataacgttcgagaacacagctggacct 496
Query: 955 caaaagggtcaagctgtagcgctccgatcagcctcagacctctcagtcttctaccgatgt 1014
| || || ||||| || || || ||||||||||| |||||||| || ||| |||| |||
Sbjct: 497 cgtaaaggccaagcagtggcacttcgatcagcctctgacctctctgtgttccaccgttgt 556
Query: 1015 gccattttaggttatcaagacaccctcatggttcacgcacaacgccaattttataaacaa 1074
|||| ||| || ||||||||||||||||| ||||||||||| || || || ||| ||
Sbjct: 557 tccatcaaaggctaccaagacaccctcatggtccacgcacaacgtcagttctacaaagaa 616
Query: 1075 tgccaaatatatggtactgtggacttaatatttggcaatgccgccgtggtttttcagaac 1134
|| | || | |||||| || || || || ||||| || ||||| ||||| || || |||
Sbjct: 617 tgttacatctttggtaccgttgatttcatctttggtaacgccgcagtggtattccaaaac 676
Query: 1135 tgcaagattttcgcaaaaaagcctttagatggccaagcaaacatgatcacggctcaagga 1194
|||| || | | || || ||||||| ||||||| |||||||||||| || |||||
Sbjct: 677 tgcatcatccttgtaagaaggcctttaccaggccaaggaaacatgatcacagcccaaggt 736
Query: 1195 cgagatgacccattccagaacactggaatcaccatccacaattctgaaatcagggcagca 1254
||||| ||||| || || ||||| || ||| | ||||||||| | |||||||| | ||
Sbjct: 737 cgagacgacccgtttcaaaacaccgggatctcattccacaattgtcaaatcaggcccgct 796
Query: 1255 ccggacctcaagcctgtcgttaacaagcacaacaccttcttgggcaggccctggcagcag 1314
||||| || ||||||||| || ||||| | ||| ||||| || |||| |||||
Sbjct: 797 ccggatctgaagcctgtcatttccaagctccccacgttcttaggacggccttggcaaaga 856
Query: 1315 tactcaagagtggtggtcttgaaaactttcatggacaccttggtgagccc 1364
||||| ||||| |||||| |||| || |||||||| ||||||||||||||
Sbjct: 857 tactctagagtagtggtcatgaagacattcatggataccttggtgagccc 906
>gnl|LJGI|TC63520 similar to UniRef100_A7QAI4 Cluster: Chromosome undetermined
scaffold_71, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_71, whole
genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 999
Score = 56.0 bits (28), Expect = 6e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1084 tatggtactgtggacttaatatttggcaatgccgccgtggtttttcagaactgcaa 1139
||||| ||||||||||| || ||||||||||| || ||||| || |||||||||||
Sbjct: 384 tatggcactgtggacttcatttttggcaatgctgcagtggtcttccagaactgcaa 439