Miyakogusa Predicted Gene

Lj0g3v0270709.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0270709.1 tr|G7KVV0|G7KVV0_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_7g050520 PE=4 SV=1,33.79,2e-18,RVT_3,NULL;
FBA_1,F-box associated domain, type 1; F_box_assoc_1: F-box protein
interaction domain,F,gene.g21015.t1.1
         (1563 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78617 similar to UniRef100_A2Q4Y0 Cluster: F-box prot...   521   e-147
gnl|LJGI|TC78296                                                      464   e-130
gnl|LJGI|TC79437                                                      454   e-127
gnl|LJGI|DC598731 similar to UniRef100_Q2HS69 Cluster: Cyclin-li...   301   7e-81
gnl|LJGI|TC79482 weakly similar to UniRef100_A7Q9Q9 Cluster: Chr...   283   2e-75
gnl|LJGI|TC73392                                                      256   4e-67
gnl|LJGI|TC67010 weakly similar to UniRef100_A4UV34 Cluster: F-b...   232   5e-60
gnl|LJGI|CB826878 similar to UniRef100_Q9BKD3 Cluster: TSO45-4B;...   111   1e-23
gnl|LJGI|TC59517 weakly similar to UniRef100_Q2HRF5 Cluster: Cyc...   105   8e-22
gnl|LJGI|GO035798 weakly similar to UniRef100_Q12X80 Cluster: 4F...   101   1e-20

>gnl|LJGI|TC78617 similar to UniRef100_A2Q4Y0 Cluster: F-box protein interaction
           domain; n=1; Medicago truncatula|Rep: F-box protein
           interaction domain - Medicago truncatula (Barrel medic),
           partial (8%)
          Length = 518

 Score =  521 bits (263), Expect = e-147
 Identities = 263/263 (100%)
 Strand = Plus / Plus

                                                                       
Query: 409 ggggttttgggaggatgcctatgtatttctcaaaataacaaggaaacgcatagttttgtg 468
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggggttttgggaggatgcctatgtatttctcaaaataacaaggaaacgcatagttttgtg 60

                                                                       
Query: 469 gtatggcaaatgaaggagtttggagtgcacgagtcttggactcaattgtttaacattatt 528
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtatggcaaatgaaggagtttggagtgcacgagtcttggactcaattgtttaacattatt 120

                                                                       
Query: 529 gtccatgaaagaattcttcacacgccctgttttgctatgtgcatgtctgagaatggtgat 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtccatgaaagaattcttcacacgccctgttttgctatgtgcatgtctgagaatggtgat 180

                                                                       
Query: 589 gccctgttgtttgcaaaatctggtgtgtcccaagcagttctctataaccagagagaaaag 648
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccctgttgtttgcaaaatctggtgtgtcccaagcagttctctataaccagagagaaaag 240

                                  
Query: 649 aaattcgaagacacaaaaattgg 671
           |||||||||||||||||||||||
Sbjct: 241 aaattcgaagacacaaaaattgg 263



 Score =  291 bits (147), Expect = 7e-78
 Identities = 147/147 (100%)
 Strand = Plus / Plus

                                                                       
Query: 672 gtctgagaatggtgatgccctgttgtttgcaaaatctggtgtgtcccaagcagttctcta 731
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gtctgagaatggtgatgccctgttgtttgcaaaatctggtgtgtcccaagcagttctcta 224

                                                                       
Query: 732 taaccagagagaaaagaaattcgaagacacaaaaattggtaacaacatcgttggttccta 791
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 taaccagagagaaaagaaattcgaagacacaaaaattggtaacaacatcgttggttccta 284

                                      
Query: 792 tgtcaggaattacattgaaagcttggt 818
           |||||||||||||||||||||||||||
Sbjct: 285 tgtcaggaattacattgaaagcttggt 311


>gnl|LJGI|TC78296 
          Length = 551

 Score =  464 bits (234), Expect = e-130
 Identities = 297/318 (93%)
 Strand = Plus / Plus

                                                                       
Query: 351 gtcattgccttattgtcctcggcgcagcaaagaattcgaagattttgtgccaattcttgg 410
           ||||||||||||||||||| ||||| | |||||||||||  |||||| | ||||||||||
Sbjct: 1   gtcattgccttattgtccttggcgccgaaaagaattcgaccattttgggtcaattcttgg 60

                                                                       
Query: 411 ggttttgggaggatgcctatgtatttctcaaaataacaaggaaacgcatagttttgtggt 470
           ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61  ggttttgagaggatgcctatgtatttctcaaaataacaaggaaacacatagttttgtggt 120

                                                                       
Query: 471 atggcaaatgaaggagtttggagtgcacgagtcttggactcaattgtttaacattattgt 530
           || |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 121 atcgcaaatgaaggagtatggagtgaacgagtcatggactcaattgtttaacattattgt 180

                                                                       
Query: 531 ccatgaaagaattcttcacacgccctgttttgctatgtgcatgtctgagaatggtgatgc 590
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| 
Sbjct: 181 ccatgaaagaattcttcactcgccctgttttgctatgtgcatgtctgagaatggtgatgt 240

                                                                       
Query: 591 cctgttgtttgcaaaatctggtgtgtcccaagcagttctctataaccagagagaaaagaa 650
           ||||||||||||| | |||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 241 cctgttgtttgcagagtctggtgtgtcccaagcagttctctataaccagagagataataa 300

                             
Query: 651 attcgaagacacaaaaat 668
           ||| |||||||| |||||
Sbjct: 301 attagaagacacgaaaat 318



 Score =  208 bits (105), Expect = 8e-53
 Identities = 132/141 (93%)
 Strand = Plus / Plus

                                                                       
Query: 672 gtctgagaatggtgatgccctgttgtttgcaaaatctggtgtgtcccaagcagttctcta 731
           ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 223 gtctgagaatggtgatgtcctgttgtttgcagagtctggtgtgtcccaagcagttctcta 282

                                                                       
Query: 732 taaccagagagaaaagaaattcgaagacacaaaaattggtaacaacatcgttggttccta 791
           |||||||||||| || ||||| |||||||| ||||| | |||||||||||||||||||||
Sbjct: 283 taaccagagagataataaattagaagacacgaaaatcgctaacaacatcgttggttccta 342

                                
Query: 792 tgtcaggaattacattgaaag 812
           |||||||||||||||||||||
Sbjct: 343 tgtcaggaattacattgaaag 363


>gnl|LJGI|TC79437 
          Length = 744

 Score =  454 bits (229), Expect = e-127
 Identities = 326/357 (91%), Gaps = 1/357 (0%)
 Strand = Plus / Plus

                                                                       
Query: 307 attgtttcgtttgatttggggaaagaagagtgggcacaacaactgtc-attgccttattg 365
           ||||||||||||||||||| |||||||||||| |||| || || ||| |||||||||| |
Sbjct: 1   attgtttcgtttgatttggagaaagaagagtgtgcacgaccaccgtccattgccttatcg 60

                                                                       
Query: 366 tcctcggcgcagcaaagaattcgaagattttgtgccaattcttggggttttgggaggatg 425
           |||| ||||| |  ||||||||||  |||||| | ||||||||||||||||| |||||||
Sbjct: 61  tccttggcgccgacaagaattcgaccattttgggtcaattcttggggttttgagaggatg 120

                                                                       
Query: 426 cctatgtatttctcaaaataacaaggaaacgcatagttttgtggtatggcaaatgaagga 485
           |||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||||
Sbjct: 121 cctatgtatttctcaatatcacaaggaaacacatagttttgtggtatcgcaaatgaagga 180

                                                                       
Query: 486 gtttggagtgcacgagtcttggactcaattgtttaacattattgtccatgaaagaattct 545
           || ||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 gtatggagtgaacgagtcatggactcaattgtttaacattattgtccatgcaagaattct 240

                                                                       
Query: 546 tcacacgccctgttttgctatgtgcatgtctgagaatggtgatgccctgttgtttgcaaa 605
           |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 241 tcactcgccctgttttgctatgtgcatgtctgagaatggtgatgtcctgttgtttgcaga 300

                                                                    
Query: 606 atctggtgtgtcccaagcagttctctataaccagagagaaaagaaattcgaagacac 662
            |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct: 301 gtctggtgtgtcccaagcagttctctataaccagagagataataaattagaagacac 357



 Score =  192 bits (97), Expect = 5e-48
 Identities = 130/141 (92%)
 Strand = Plus / Plus

                                                                       
Query: 672 gtctgagaatggtgatgccctgttgtttgcaaaatctggtgtgtcccaagcagttctcta 731
           ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 268 gtctgagaatggtgatgtcctgttgtttgcagagtctggtgtgtcccaagcagttctcta 327

                                                                       
Query: 732 taaccagagagaaaagaaattcgaagacacaaaaattggtaacaacatcgttggttccta 791
           |||||||||||| || ||||| |||||||| || || | |||||||||||||||||||||
Sbjct: 328 taaccagagagataataaattagaagacacgaacatcgctaacaacatcgttggttccta 387

                                
Query: 792 tgtcaggaattacattgaaag 812
           ||||||| |||||||||||||
Sbjct: 388 tgtcaggcattacattgaaag 408


>gnl|LJGI|DC598731 similar to UniRef100_Q2HS69 Cluster: Cyclin-like F-box; F-box
           protein interaction domain; n=1; Medicago
           truncatula|Rep: Cyclin-like F-box; F-box protein
           interaction domain - Medicago truncatula (Barrel medic),
           partial (14%)
          Length = 592

 Score =  301 bits (152), Expect = 7e-81
 Identities = 152/152 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctcaagattcgccgccttcgtgttccccgggctttctccatctcgggattggttat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtctcaagattcgccgccttcgtgttccccgggctttctccatctcgggattggttat 500

                                                                       
Query: 61  gattgtttaagtgacacctacaaggtggttggagtgaaccctgacgtgacaatggtgaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gattgtttaagtgacacctacaaggtggttggagtgaaccctgacgtgacaatggtgaat 560

                                           
Query: 121 gtttacaacatgggtgataaatgttggagtac 152
           ||||||||||||||||||||||||||||||||
Sbjct: 561 gtttacaacatgggtgataaatgttggagtac 592


>gnl|LJGI|TC79482 weakly similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5
           scaffold_67, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 551

 Score =  283 bits (143), Expect = 2e-75
 Identities = 209/231 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctcaagattcgccgccttcgtgttccccgggctttctccatctcgggattggttat 60
           ||||||||||||||||| ||||| || |||||  ||  ||||||||| ||| ||||||||
Sbjct: 279 atgtctcaagattcgccaccttcatggtccccccgcaatctccatcttgggtttggttat 338

                                                                       
Query: 61  gattgtttaagtgacacctacaaggtggttggagtgaaccctgacgtgacaatggtgaat 120
           ||||||| ||||||||||||||||||||| ||| ||| ||||| | ||||||||||||||
Sbjct: 339 gattgttcaagtgacacctacaaggtggtcggaatgatccctggcttgacaatggtgaat 398

                                                                       
Query: 121 gtttacaacatgggtgataaatgttggagtacaattcaaatttttcctcatacccctatg 180
           |||||||||||||||||||| |||||||| |||||||||||||  |||||| ||||||||
Sbjct: 399 gtttacaacatgggtgataattgttggagaacaattcaaatttcccctcatgcccctatg 458

                                                              
Query: 181 catctccaaggatttgaagtttatgtgagtaacactcttaattggttagca 231
           ||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 459 catctccaaggatctgcagtttatgtgagtaacactcttaattggttagca 509



 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 296 atccgtacttcattgtttcgtttgatttggggaaa 330
           |||||||||||||||||||||||||||||| ||||
Sbjct: 517 atccgtacttcattgtttcgtttgatttggagaaa 551


>gnl|LJGI|TC73392 
          Length = 647

 Score =  256 bits (129), Expect = 4e-67
 Identities = 209/233 (89%), Gaps = 2/233 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctcaagattcgccgccttcgtgttccccgggctttctccatctcgggatt-ggtta 59
           ||||||||||||||||| ||||| || |||||  ||  ||||||||| ||| || |||||
Sbjct: 313 atgtctcaagattcgccaccttcatggtccccccgcaatctccatcttgggttttggtta 372

                                                                       
Query: 60  tgatt-gtttaagtgacacctacaaggtggttggagtgaaccctgacgtgacaatggtga 118
           ||||| ||| ||||||||||||||||||||| ||| ||| ||||| | ||||||||||||
Sbjct: 373 tgatttgttcaagtgacacctacaaggtggtcggaatgatccctggcttgacaatggtga 432

                                                                       
Query: 119 atgtttacaacatgggtgataaatgttggagtacaattcaaatttttcctcataccccta 178
           |||||||||||||||||||||| |||||||| |||||||||||||  |||||| ||||||
Sbjct: 433 atgtttacaacatgggtgataattgttggagaacaattcaaatttcccctcatgccccta 492

                                                                
Query: 179 tgcatctccaaggatttgaagtttatgtgagtaacactcttaattggttagca 231
           ||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 493 tgcatctccaaggatctgcagtttatgtgagtaacactcttaattggttagca 545



 Score =  147 bits (74), Expect = 2e-34
 Identities = 89/94 (94%)
 Strand = Plus / Plus

                                                                       
Query: 296 atccgtacttcattgtttcgtttgatttggggaaagaagagtgggcacaacaactgtcat 355
           |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 553 atccgtacttcattgtttcgtttgatttggagaaagaagagtgtgcacaacaactgtcat 612

                                             
Query: 356 tgccttattgtcctcggcgcagcaaagaattcga 389
           |||||||||||||| ||||| | |||||||||||
Sbjct: 613 tgccttattgtccttggcgccgaaaagaattcga 646


>gnl|LJGI|TC67010 weakly similar to UniRef100_A4UV34 Cluster: F-box domain-containing
           protein; n=2; Solanum|Rep: F-box domain-containing
           protein - Solanum tuberosum (Potato), partial (15%)
          Length = 1074

 Score =  232 bits (117), Expect = 5e-60
 Identities = 183/205 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctcaagattcgccgccttcgtgttccccgggctttctccatctcgggattggttat 60
           ||||||||||||||||| ||||| || |||||  ||  ||||||||| ||| ||||||||
Sbjct: 450 atgtctcaagattcgccaccttcatggtccccccgcaatctccatcttgggtttggttat 509

                                                                       
Query: 61  gattgtttaagtgacacctacaaggtggttggagtgaaccctgacgtgacaatggtgaat 120
           ||||||| ||||||||||||||||||||| ||| ||| ||||| | ||||||||||||||
Sbjct: 510 gattgttcaagtgacacctacaaggtggtcggaatgatccctggcttgacaatggtgaat 569

                                                                       
Query: 121 gtttacaacatgggtgataaatgttggagtacaattcaaatttttcctcatacccctatg 180
           |||||||||||||||||||| |||||||| |||||||||||||  |||||| ||||||||
Sbjct: 570 gtttacaacatgggtgataattgttggagaacaattcaaatttcccctcatgcccctatg 629

                                    
Query: 181 catctccaaggatttgaagtttatg 205
           ||||||||||||| || ||||||||
Sbjct: 630 catctccaaggatctgcagtttatg 654


>gnl|LJGI|CB826878 similar to UniRef100_Q9BKD3 Cluster: TSO45-4B; n=1; Taenia
           solium|Rep: TSO45-4B - Taenia solium (Pork tapeworm),
           partial (5%)
          Length = 635

 Score =  111 bits (56), Expect = 1e-23
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                       
Query: 426 cctatgtatttctcaaaataacaaggaaacgcatagttttgtggtatggcaaatgaagga 485
           ||||||| ||||||||||| ||||| |||| | || ||||||||| ||||||||||||||
Sbjct: 410 cctatgtgtttctcaaaatgacaagaaaacccgtaattttgtggtttggcaaatgaagga 469

                                                       
Query: 486 gtttggagtgcacgagtcttggactcaattgtttaacattattg 529
           ||||||||||||| |||| |||||||| ||||| ||||| ||||
Sbjct: 470 gtttggagtgcacaagtcatggactcagttgttcaacatcattg 513



 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 673 tctgagaatggtgatgccctgttgtttgcaaaatctggtgtgtcccaagcagttctctat 732
           ||||||||||| |||||| |||||||  ||| || ||||| |||||||||| ||||||||
Sbjct: 563 tctgagaatggggatgccttgttgttgtcaacatatggtgggtcccaagcaattctctat 622

            
Query: 733 a 733
           |
Sbjct: 623 a 623


>gnl|LJGI|TC59517 weakly similar to UniRef100_Q2HRF5 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (42%)
          Length = 1382

 Score =  105 bits (53), Expect = 8e-22
 Identities = 189/233 (81%), Gaps = 6/233 (2%)
 Strand = Plus / Plus

                                                                       
Query: 294 tgatccgtacttcattgtttcgtttgatttggggaaagaagagtgggcacaacaactgtc 353
           |||||| ||||| ||| ||||||||||||||||||||||| |    |||||||   ||||
Sbjct: 720 tgatccatacttaattttttcgtttgatttggggaaagaaaacaatgcacaac---tgtc 776

                                                                       
Query: 354 attgccttattgtcctcggcgcagcaaagaattcgaagattttgtgccaattcttggggt 413
           |||||||||| || |||| |||||  | ||| ||   ||||||  ||||| |||||||||
Sbjct: 777 attgccttatagtgctcgacgcagatatgaaatccccgattttaggccaaatcttggggt 836

                                                                       
Query: 414 tttgggaggatgcctatgtatttctcaaaataacaaggaaacgcatagttttgtggtatg 473
           ||||| ||| ||||||||| ||| ||| | ||||||| || | |||   |||| | | ||
Sbjct: 837 tttggaaggttgcctatgtttttgtcacactaacaagaaatctcat---tttgcgatttg 893

                                                                
Query: 474 gcaaatgaaggagtttggagtgcacgagtcttggactcaattgtttaacatta 526
           ||||||||| ||||||||||||||| | ||||||||||| |||||||| ||||
Sbjct: 894 gcaaatgaaagagtttggagtgcacaattcttggactcagttgtttaaaatta 946



 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 53  ttggttatgattgtttaagtgacacctacaa 83
           ||||||||||||||| |||||||||||||||
Sbjct: 470 ttggttatgattgttcaagtgacacctacaa 500



 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 198 agtttatgtgagtaacactcttaattggttagcaactctacca 240
           |||| ||||||| |||||||||||||||||||||  |||||||
Sbjct: 636 agttaatgtgagcaacactcttaattggttagcatttctacca 678


>gnl|LJGI|GO035798 weakly similar to UniRef100_Q12X80 Cluster: 4Fe-4S ferredoxin,
           iron-sulfur binding; n=1; Methanococcoides burtonii DSM
           6242|Rep: 4Fe-4S ferredoxin, iron-sulfur binding -
           Methanococcoides burtonii (strain DSM 6242), partial
           (10%)
          Length = 581

 Score =  101 bits (51), Expect = 1e-20
 Identities = 139/163 (85%), Gaps = 4/163 (2%)
 Strand = Plus / Plus

                                                                       
Query: 472 tggcaaatgaaggagtttggagtgcacgagtcttggactcaattgtttaacattattgtc 531
           ||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||| ||
Sbjct: 81  tggcaaatgaaggagtttggagtacacaagtcttggactcagttgttgaacattattttc 140

                                                                       
Query: 532 catgaaagaattc-ttcacacgccctgttttgctatgtgcatgtctgagaatggtgatgc 590
            ||| || |||||  |||   ||||| |||| | |||||||||||||| |||||||||||
Sbjct: 141 tatggaa-aattcagtcaatggccctattttccgatgtgcatgtctgataatggtgatgc 199

                                                      
Query: 591 cctgttgtttgcaa-aatctggtgtgtcccaagcagttctcta 632
           | ||||| |||||| | | | ||| ||||||||||||||||||
Sbjct: 200 cttgttg-ttgcaagattattgtgggtcccaagcagttctcta 241