Miyakogusa Predicted Gene

Lj0g3v0269859.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0269859.1 Non Chatacterized Hit- tr|I1K1W7|I1K1W7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.97,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopept,CUFF.17834.1
         (1819 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV769545 weakly similar to UniRef100_Q8GVW4 Cluster: Se...   470   e-131

>gnl|LJGI|AV769545 weakly similar to UniRef100_Q8GVW4 Cluster: Selenium-binding
            protein-like; n=1; Oryza sativa Japonica Group|Rep:
            Selenium-binding protein-like - Oryza sativa subsp.
            japonica (Rice), partial (6%)
          Length = 536

 Score =  470 bits (237), Expect = e-131
 Identities = 244/245 (99%), Gaps = 1/245 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1576 atttattgtgtggacaagaattggcataatgct-gcaaaacttaggtcattgattaagga 1634
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 536  atttattgtgtggacaagaattggcataatgcttgcaaaacttaggtcattgattaagga 477

                                                                        
Query: 1635 gaatagattgaagaaggttttaggtcaaagtatggttgagttaaagaatgaggttcacag 1694
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476  gaatagattgaagaaggttttaggtcaaagtatggttgagttaaagaatgaggttcacag 417

                                                                        
Query: 1695 ttttgtagctagtgatagattccatgatgaatctgatcagatttttgaagttctgagaaa 1754
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416  ttttgtagctagtgatagattccatgatgaatctgatcagatttttgaagttctgagaaa 357

                                                                        
Query: 1755 attagatgtgaagatgagagaagaatgttatgaacatcaactaaagatagaggaagtcat 1814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356  attagatgtgaagatgagagaagaatgttatgaacatcaactaaagatagaggaagtcat 297

                 
Query: 1815 gtaaa 1819
            |||||
Sbjct: 296  gtaaa 292