Miyakogusa Predicted Gene

Lj0g3v0269409.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0269409.2 tr|G7IL24|G7IL24_MEDTR E3 ubiquitin-protein
ligase UPL6 OS=Medicago truncatula GN=MTR_2g033040 PE=4 ,91.49,0,Hect,
E3 ligase catalytic domain,HECT; HECT,HECT; PREDICTED: HYPOTHETICAL
PROTEIN, PARTIAL,NULL; HEC,CUFF.17808.2
         (288 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66358 similar to UniRef100_A7Q8U7 Cluster: Chromosome...   571   e-163

>gnl|LJGI|TC66358 similar to UniRef100_A7Q8U7 Cluster: Chromosome chr5 scaffold_64,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_64, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 666

 Score =  571 bits (288), Expect = e-163
 Identities = 288/288 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttatgggaagttctcaaaggattttcaatggaaaacaagaagaaatttttaaagttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  atgttatgggaagttctcaaaggattttcaatggaaaacaagaagaaatttttaaagttt 154

                                                                       
Query: 61  gtgacaggttgctctcgcggaccattgcttggatttcgatatcttgaacctttgttttgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gtgacaggttgctctcgcggaccattgcttggatttcgatatcttgaacctttgttttgc 214

                                                                       
Query: 121 atacagagggccggtggtaatgcttcagaggaagctcttgaccggttaccaacatcagct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atacagagggccggtggtaatgcttcagaggaagctcttgaccggttaccaacatcagct 274

                                                                       
Query: 181 acttgtatgaatctactaaagcttccaccttatagaagtaaggagcaaatggaaaccaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 acttgtatgaatctactaaagcttccaccttatagaagtaaggagcaaatggaaaccaaa 334

                                                           
Query: 241 cttctgtatgccataaatgctgatgctggctttgatttgagttaaaag 288
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cttctgtatgccataaatgctgatgctggctttgatttgagttaaaag 382