Miyakogusa Predicted Gene

Lj0g3v0269299.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0269299.1 Non Chatacterized Hit- tr|Q5NVP1|Q5NVP1_PONAB
Putative uncharacterized protein DKFZp459E2020 OS=Pong,44.19,3.4,
,CUFF.17788.1
         (144 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP064478                                                     274   1e-73
gnl|LJGI|BP065414 similar to UniRef100_Q7S6W7 Cluster: Predicted...    76   6e-14
gnl|LJGI|TC70767                                                       76   6e-14
gnl|LJGI|TC78459 weakly similar to UniRef100_Q1DC18 Cluster: Sen...    68   1e-11

>gnl|LJGI|BP064478 
          Length = 509

 Score =  274 bits (138), Expect = 1e-73
 Identities = 138/138 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgctagctttgatggcagggactgcaatgttccttttgcctaggcagggtttgggctct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atgctagctttgatggcagggactgcaatgttccttttgcctaggcagggtttgggctct 267

                                                                       
Query: 61  aaacagcaaaccccaacaattggggacacatctaaactaataaaatctcgtcaagtttcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aaacagcaaaccccaacaattggggacacatctaaactaataaaatctcgtcaagtttcc 207

                             
Query: 121 catggaactggacttaag 138
           ||||||||||||||||||
Sbjct: 206 catggaactggacttaag 189


>gnl|LJGI|BP065414 similar to UniRef100_Q7S6W7 Cluster: Predicted protein; n=1;
           Neurospora crassa|Rep: Predicted protein - Neurospora
           crassa, partial (3%)
          Length = 498

 Score = 75.8 bits (38), Expect = 6e-14
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 1   atgctagctttgatggcagggactgcaatgttccttttgcctaggcaggg 50
           |||||||||||||||| |||||||||| |||||||||| |||||||||||
Sbjct: 343 atgctagctttgatggtagggactgcagtgttcctttttcctaggcaggg 294


>gnl|LJGI|TC70767 
          Length = 626

 Score = 75.8 bits (38), Expect = 6e-14
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 1   atgctagctttgatggcagggactgcaatgttccttttgcctaggcaggg 50
           |||||||||||||||| |||||||||| |||||||||| |||||||||||
Sbjct: 156 atgctagctttgatggtagggactgcagtgttcctttttcctaggcaggg 205


>gnl|LJGI|TC78459 weakly similar to UniRef100_Q1DC18 Cluster: Sensor protein; n=1;
           Myxococcus xanthus DK 1622|Rep: Sensor protein -
           Myxococcus xanthus (strain DK 1622), partial (4%)
          Length = 513

 Score = 67.9 bits (34), Expect = 1e-11
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 18  agggactgcaatgttccttttgcctaggcagggtttgggctctaaacagcaaaccccaac 77
           ||||||| || | |||||||||||||||||||||||||| | ||||||||| | | ||||
Sbjct: 146 agggactacagtattccttttgcctaggcagggtttgggatttaaacagcacatcgcaac 205

                                 
Query: 78  aattggggacacatctaaacta 99
           || || ||||||  ||||||||
Sbjct: 206 aaatgaggacactgctaaacta 227