Miyakogusa Predicted Gene

Lj0g3v0269099.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0269099.1 Non Chatacterized Hit- tr|A5BUF2|A5BUF2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,75.95,1e-18,seg,NULL; coiled-coil,NULL; Use1,Vesicle transport
protein, Use1; SUBFAMILY NOT NAMED,NULL; FAMILY N,gene.g20879.t1.1
         (240 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71020 similar to UniRef100_A7Q6A8 Cluster: Chromosome...   440   e-123

>gnl|LJGI|TC71020 similar to UniRef100_A7Q6A8 Cluster: Chromosome chr11 scaffold_56,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_56, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 518

 Score =  440 bits (222), Expect = e-123
 Identities = 225/226 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtatcagtaaaacagaagtaaatttgaagaggttgcttgcggctgctcctcagcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atgggtatcagtaaaacagaagtaaatttgaagaggttgcttgcggctgctcctcagcag 339

                                                                       
Query: 61  caaaaccaggcaaaacttgtacattatgttgctacgttgcgtgaacagttggaacaattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 caaaaccaggcaaaacttgtacattatgttgctacgttgcgtgaacagttggaacaattg 399

                                                                       
Query: 121 gctgaagagaagacaccagaaggcttaccaaggatttcaaaggctattttgaatgattat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gctgaagagaagacaccagaaggcttaccaaggatttcaaaggctattttgaatgattat 459

                                                         
Query: 181 tcagagaagattgaagccattgcttgcaagttggttaacagtgagc 226
           ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tcaaagaagattgaagccattgcttgcaagttggttaacagtgagc 505