Miyakogusa Predicted Gene
- Lj0g3v0268989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0268989.1 Non Chatacterized Hit- tr|I3SUJ1|I3SUJ1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.29,0,L
domain-like,NULL; LRR,Leucine-rich repeat; no description,NULL; U2
SMALL NUCLEAR RIBONUCLEOPROTEIN,CUFF.17777.1
(843 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60796 similar to UniRef100_A7QTC6 Cluster: Chromosome... 1671 0.0
gnl|LJGI|TC59749 similar to UniRef100_A7QTC6 Cluster: Chromosome... 1074 0.0
gnl|LJGI|FS331296 homologue to UniRef100_P43333 Cluster: U2 smal... 676 0.0
gnl|LJGI|DC598748 homologue to UniRef100_P43333 Cluster: U2 smal... 660 0.0
gnl|LJGI|TC75589 similar to UniRef100_A7QTC6 Cluster: Chromosome... 329 2e-89
gnl|LJGI|TC71259 similar to UniRef100_A7QTC6 Cluster: Chromosome... 103 2e-21
>gnl|LJGI|TC60796 similar to UniRef100_A7QTC6 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1268
Score = 1671 bits (843), Expect = 0.0
Identities = 843/843 (100%)
Strand = Plus / Plus
Query: 1 atggtgaggctcactgcagacttgatctggaaaagccctcatttcttcaatgccattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atggtgaggctcactgcagacttgatctggaaaagccctcatttcttcaatgccattaaa 145
Query: 61 gagcgcgagttggatcttcgtggcaacaagattgctgtaattgaaaacttaggcgccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gagcgcgagttggatcttcgtggcaacaagattgctgtaattgaaaacttaggcgccaca 205
Query: 121 gaggaccaatttgataccctagatttgtctgataatgagattgtcaaactggaaaacata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaggaccaatttgataccctagatttgtctgataatgagattgtcaaactggaaaacata 265
Query: 181 ccatatcttaatcgattgggtacactactcataaataacaatagagttaccagaattaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ccatatcttaatcgattgggtacactactcataaataacaatagagttaccagaattaat 325
Query: 241 cccaacattggagagtttttaccgaatttacacacgcttgttctcacaaacaacagaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cccaacattggagagtttttaccgaatttacacacgcttgttctcacaaacaacagaatt 385
Query: 301 gtaaacctagttgaaatagatcctttagcttcccttccaaagcttcagtttcttagtctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtaaacctagttgaaatagatcctttagcttcccttccaaagcttcagtttcttagtctg 445
Query: 361 ctagacaacaatattacaaagaaacctaattacaggctttatgttattagcaagctcgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ctagacaacaatattacaaagaaacctaattacaggctttatgttattagcaagctcgac 505
Query: 421 tcgctccgtgttttggatttcaagaaagtcaaaaataaggaacggttggaggccaaaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tcgctccgtgttttggatttcaagaaagtcaaaaataaggaacggttggaggccaaaaac 565
Query: 481 ttgtttggttcagaggaagctatagaaaatgctcaaaagacaccagtgaaaacgatttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttgtttggttcagaggaagctatagaaaatgctcaaaagacaccagtgaaaacgatttca 625
Query: 541 cctgctgaaactcctgatgtttcagaagctacggaggaacaacagacacccaaagtggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cctgctgaaactcctgatgtttcagaagctacggaggaacaacagacacccaaagtggtt 685
Query: 601 gctcccacaccggagcaaattattgctattaaggctgctatcgtgaattcacagaccctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gctcccacaccggagcaaattattgctattaaggctgctatcgtgaattcacagaccctt 745
Query: 661 gaagaggttgctagacttgaaaaggcactgaagtctggtctactccctgaagatttaaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gaagaggttgctagacttgaaaaggcactgaagtctggtctactccctgaagatttaaaa 805
Query: 721 agcttgaatggcaatgtaacgttggataatgttaatgaaaaaggtgaagatgtggttcat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 agcttgaatggcaatgtaacgttggataatgttaatgaaaaaggtgaagatgtggttcat 865
Query: 781 gatgaatctaatgatacacgagagcagaaaaatactgattctgctgcaatggaacaggat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 gatgaatctaatgatacacgagagcagaaaaatactgattctgctgcaatggaacaggat 925
Query: 841 taa 843
|||
Sbjct: 926 taa 928
>gnl|LJGI|TC59749 similar to UniRef100_A7QTC6 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 783
Score = 1074 bits (542), Expect = 0.0
Identities = 644/678 (94%)
Strand = Plus / Plus
Query: 1 atggtgaggctcactgcagacttgatctggaaaagccctcatttcttcaatgccattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atggtgaggctcactgcagacttgatctggaaaagccctcatttcttcaatgccattaaa 165
Query: 61 gagcgcgagttggatcttcgtggcaacaagattgctgtaattgaaaacttaggcgccaca 120
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gagcgcgagttagatcttcgaggcaacaagattgctgtaattgaaaacttaggcgccaca 225
Query: 121 gaggaccaatttgataccctagatttgtctgataatgagattgtcaaactggaaaacata 180
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 226 gaggaccaatttgataccctagatctgtctgacaatgagattgtcaaactggaaaacata 285
Query: 181 ccatatcttaatcgattgggtacactactcataaataacaatagagttaccagaattaat 240
|||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 286 ccatatcttaatcggttgggtacactactcataaataacaatagaattacgagaattaat 345
Query: 241 cccaacattggagagtttttaccgaatttacacacgcttgttctcacaaacaacagaatt 300
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 346 cccaacattggagaatttttaccaaatttacacacgcttgttctcacaaacaacagaatt 405
Query: 301 gtaaacctagttgaaatagatcctttagcttcccttccaaagcttcagtttcttagtctg 360
||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 406 gtaaacctagtagaaatagatcctttagcatcccttccaaagctgcagttccttagtctg 465
Query: 361 ctagacaacaatattacaaagaaacctaattacaggctttatgttattagcaagctcgac 420
|||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||| |
Sbjct: 466 ctagacaataatattacaaagaaagcaaattacaggctttatgtcattagcaagctgaag 525
Query: 421 tcgctccgtgttttggatttcaagaaagtcaaaaataaggaacggttggaggccaaaaac 480
|| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 526 tccctccgtgttttggatttcaagaaagtgaaaaataaggaacggttggaagccaaaaat 585
Query: 481 ttgtttggttcagaggaagctatagaaaatgctcaaaagacaccagtgaaaacgatttca 540
||||||| ||||||||||| ||||||||| | ||||||||||||||||||||||||||||
Sbjct: 586 ttgtttgcttcagaggaagttatagaaaaagttcaaaagacaccagtgaaaacgatttca 645
Query: 541 cctgctgaaactcctgatgtttcagaagctacggaggaacaacagacacccaaagtggtt 600
|||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 646 cctggtgaaactcctaatgtttcagaagctacggaggaccaacagacacccaaagtggtt 705
Query: 601 gctcccacaccggagcaaattattgctattaaggctgctatcgtgaattcacagaccctt 660
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 706 gctcccacaccagagcaaattattgctattaaggctgccatcgtgaattcacagactctt 765
Query: 661 gaagaggttgctagactt 678
||||||||||||||||||
Sbjct: 766 gaagaggttgctagactt 783
>gnl|LJGI|FS331296 homologue to UniRef100_P43333 Cluster: U2 small nuclear
ribonucleoprotein A'; n=1; Arabidopsis thaliana|Rep: U2
small nuclear ribonucleoprotein A' - Arabidopsis
thaliana (Mouse-ear cress), partial (55%)
Length = 691
Score = 676 bits (341), Expect = 0.0
Identities = 392/409 (95%)
Strand = Plus / Plus
Query: 1 atggtgaggctcactgcagacttgatctggaaaagccctcatttcttcaatgccattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 atggtgaggctcactgcagacttgatctggaaaagccctcatttcttcaatgccattaaa 342
Query: 61 gagcgcgagttggatcttcgtggcaacaagattgctgtaattgaaaacttaggcgccaca 120
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gagcgcgagttagatcttcgaggcaacaagattgctgtaattgaaaacttaggcgccaca 402
Query: 121 gaggaccaatttgataccctagatttgtctgataatgagattgtcaaactggaaaacata 180
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 403 gaggaccaatttgataccctagatctgtctgacaatgagattgtcaaactggaaaacata 462
Query: 181 ccatatcttaatcgattgggtacactactcataaataacaatagagttaccagaattaat 240
|||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 463 ccatatcttaatcggttgggtacactactcataaataacaatagaattacgagaattaat 522
Query: 241 cccaacattggagagtttttaccgaatttacacacgcttgttctcacaaacaacagaatt 300
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 523 cccaacattggagaatttttaccaaatttacacacgcttgttctcacaaacaacagaatt 582
Query: 301 gtaaacctagttgaaatagatcctttagcttcccttccaaagcttcagtttcttagtctg 360
||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 583 gtaaacctagtagaaatagatcctttagcatcccttccaaagctgcagttccttagtctg 642
Query: 361 ctagacaacaatattacaaagaaacctaattacaggctttatgttatta 409
|||||||| ||||||||||||||| | ||||||||||||||||| ||||
Sbjct: 643 ctagacaataatattacaaagaaagcaaattacaggctttatgtcatta 691
>gnl|LJGI|DC598748 homologue to UniRef100_P43333 Cluster: U2 small nuclear
ribonucleoprotein A'; n=1; Arabidopsis thaliana|Rep: U2
small nuclear ribonucleoprotein A' - Arabidopsis
thaliana (Mouse-ear cress), partial (54%)
Length = 577
Score = 660 bits (333), Expect = 0.0
Identities = 386/404 (95%)
Strand = Plus / Plus
Query: 1 atggtgaggctcactgcagacttgatctggaaaagccctcatttcttcaatgccattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atggtgaggctcactgcagacttgatctggaaaagccctcatttcttcaatgccattaaa 230
Query: 61 gagcgcgagttggatcttcgtggcaacaagattgctgtaattgaaaacttaggcgccaca 120
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gagcgcgagttagatcttcgaggcaacaagattgctgtaattgaaaacttaggcgccaca 290
Query: 121 gaggaccaatttgataccctagatttgtctgataatgagattgtcaaactggaaaacata 180
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 291 gaggaccaatttgataccctagatctgtctgacaatgagattgtcaaactggaaaacata 350
Query: 181 ccatatcttaatcgattgggtacactactcataaataacaatagagttaccagaattaat 240
|||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 351 ccatatcttaatcggttgggtacactactcataaataacaatagaattacgagaattaat 410
Query: 241 cccaacattggagagtttttaccgaatttacacacgcttgttctcacaaacaacagaatt 300
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 411 cccaacattggagaatttttaccaaatttacacacgcttgttctcacaaacaacagaatt 470
Query: 301 gtaaacctagttgaaatagatcctttagcttcccttccaaagcttcagtttcttagtctg 360
||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 471 gtaaacctagtagaaatagatcctttagcatcccttccaaagctgcagttccttagtctg 530
Query: 361 ctagacaacaatattacaaagaaacctaattacaggctttatgt 404
|||||||| ||||||| |||||| | |||||||||||||||||
Sbjct: 531 ctagacaataatattancaagaaagcaaattacaggctttatgt 574
>gnl|LJGI|TC75589 similar to UniRef100_A7QTC6 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 500
Score = 329 bits (166), Expect = 2e-89
Identities = 175/178 (98%)
Strand = Plus / Plus
Query: 666 ggttgctagacttgaaaaggcactgaagtctggtctactccctgaagatttaaaaagctt 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttgctagacttgaaaaggcactgaagtctggtctactccctgaagatttaaaaagctt 60
Query: 726 gaatggcaatgtaacgttggataatgttaatgaaaaaggtgaagatgtggttcatgatga 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaatggcaatgtaacgttggataatgttaatgaaaaaggtgaagatgtggttcatgatga 120
Query: 786 atctaatgatacacgagagcagaaaaatactgattctgctgcaatggaacaggattaa 843
|||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 121 atctaatgatacgcgagagcagagaaatactgattctgctgcaatgggacaggattaa 178
>gnl|LJGI|TC71259 similar to UniRef100_A7QTC6 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 551
Score = 103 bits (52), Expect = 2e-21
Identities = 100/115 (86%), Gaps = 2/115 (1%)
Strand = Plus / Plus
Query: 619 attattgctattaaggctgctatcgtgaattcacagacccttgaagaggttgctagactt 678
|||||||||||| || |||| |||||||||||| ||| ||||||||| |||| | ||||
Sbjct: 396 attattgctatttagtctgccatcgtgaattca--gactcttgaagagtttgccacactt 453
Query: 679 gaaaaggcactgaagtctggtctactccctgaagatttaaaaagcttgaatggca 733
||||||||||||||||||||| ||| |||||||| |||| |||||||||||||
Sbjct: 454 gaaaaggcactgaagtctggtacactttctgaagatataaatagcttgaatggca 508