Miyakogusa Predicted Gene
- Lj0g3v0268939.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0268939.1 tr|E0X6S2|E0X6S2_GLYUR
3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Glycyrrhiza
uralensis GN=H,93.52,0,HMGCOARDTASE,Hydroxymethylglutaryl-CoA
reductase, class I/II;
HMG_COA_REDUCTASE_4,Hydroxymethylgluta,
NODE_44963_length_1648_cov_66.134102.path2.1
(885 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75802 homologue to UniRef100_A9YVC5 Cluster: 3-hydrox... 880 0.0
gnl|LJGI|TC70923 homologue to UniRef100_Q8W2E3 Cluster: 3-hydrox... 593 e-169
gnl|LJGI|AV423763 similar to UniRef100_A9YVC5 Cluster: 3-hydroxy... 581 e-165
gnl|LJGI|TC57918 similar to UniRef100_A9YVC3 Cluster: 3-hydroxy-... 504 e-142
gnl|LJGI|TC70601 homologue to UniRef100_A9YVC1 Cluster: 3-hydrox... 283 9e-76
gnl|LJGI|TC73370 homologue to UniRef100_A7QPH4 Cluster: Chromoso... 266 2e-70
gnl|LJGI|TC59023 similar to UniRef100_Q1HB06 Cluster: 3-hydroxy-... 86 4e-16
>gnl|LJGI|TC75802 homologue to UniRef100_A9YVC5 Cluster: 3-hydroxy-3-methylglutaryl
coenzyme A reductase 5; n=1; Medicago truncatula|Rep:
3-hydroxy-3-methylglutaryl coenzyme A reductase 5 -
Medicago truncatula (Barrel medic), partial (26%)
Length = 480
Score = 880 bits (444), Expect = 0.0
Identities = 457/460 (99%), Gaps = 1/460 (0%)
Strand = Plus / Plus
Query: 1 atgactagagcccctgttgttcgcttcgccactgcgaagagagctgcacagttgaaattc 60
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 22 atgactagagcccctgttgttcgcctt-ccactgcgaagagagctgcacagttgaaattc 80
Query: 61 tacctcgaagatcccctcaattttgattcccttgctgttgttttcaataggtcaagcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tacctcgaagatcccctcaattttgattcccttgctgttgttttcaataggtcaagcaga 140
Query: 121 tttgctaggttacagagcattcaacctgctattgctggcaagaatttgtacattagattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tttgctaggttacagagcattcaacctgctattgctggcaagaatttgtacattagattc 200
Query: 181 cgttgcagcactggcgatgccatggggatgaacatagtgtccaaaggtgtccaaaatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgttgcagcactggcgatgccatggggatgaacatagtgtccaaaggtgtccaaaatgta 260
Query: 241 cttgatttccttcagagcgacttccctgacatggatgttattggaatctctggaaatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgatttccttcagagcgacttccctgacatggatgttattggaatctctggaaatttc 320
Query: 301 tgttccgacaagaaagctgcagctgtgaactggattgaagggcgtggcaagtctgttgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttccgacaagaaagctgcagctgtgaactggattgaagggcgtggcaagtctgttgtc 380
Query: 361 tgcgaggctataattaaggaagaggtggtgaagaaggtattaaagactagtgtggaggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcgaggctataattaaggaagaggtggtgaagaaggtattaaagactagtgtggaggca 440
Query: 421 ctagtcgagcttaacatgcttaagaacctgactggctcag 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctagtcgagcttaacatgcttaagaacctgactggctcag 480
>gnl|LJGI|TC70923 homologue to UniRef100_Q8W2E3 Cluster: 3-hydroxy-3-methylglutaryl
coenzyme A; n=1; Pisum sativum|Rep:
3-hydroxy-3-methylglutaryl coenzyme A - Pisum sativum
(Garden pea), partial (17%)
Length = 698
Score = 593 bits (299), Expect = e-169
Identities = 299/299 (100%)
Strand = Plus / Plus
Query: 587 ctgtgaatgatggcaaggaccttcacatttccgtcaccatgccttcgattgaggttggta 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtgaatgatggcaaggaccttcacatttccgtcaccatgccttcgattgaggttggta 60
Query: 647 ctgttggagggggcacacaactcgcatctcagtcggcttgtcttaatttacttggtgtca 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgttggagggggcacacaactcgcatctcagtcggcttgtcttaatttacttggtgtca 120
Query: 707 agggtgccagtaaagaagctccaggtgcaaattctaggctattggccaccatagtagctg 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agggtgccagtaaagaagctccaggtgcaaattctaggctattggccaccatagtagctg 180
Query: 767 gttccgtccttgctggggagctatcactgatgtctgcaattgctgccgggcaactcgtta 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttccgtccttgctggggagctatcactgatgtctgcaattgctgccgggcaactcgtta 240
Query: 827 agagccacatgaaatacaacagatctagcaaggatatctccaaaattgtctcatagagc 885
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagccacatgaaatacaacagatctagcaaggatatctccaaaattgtctcatagagc 299
>gnl|LJGI|AV423763 similar to UniRef100_A9YVC5 Cluster: 3-hydroxy-3-methylglutaryl
coenzyme A reductase 5; n=1; Medicago truncatula|Rep:
3-hydroxy-3-methylglutaryl coenzyme A reductase 5 -
Medicago truncatula (Barrel medic), partial (21%)
Length = 365
Score = 581 bits (293), Expect = e-165
Identities = 293/293 (100%)
Strand = Plus / Plus
Query: 1 atgactagagcccctgttgttcgcttcgccactgcgaagagagctgcacagttgaaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atgactagagcccctgttgttcgcttcgccactgcgaagagagctgcacagttgaaattc 132
Query: 61 tacctcgaagatcccctcaattttgattcccttgctgttgttttcaataggtcaagcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tacctcgaagatcccctcaattttgattcccttgctgttgttttcaataggtcaagcaga 192
Query: 121 tttgctaggttacagagcattcaacctgctattgctggcaagaatttgtacattagattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tttgctaggttacagagcattcaacctgctattgctggcaagaatttgtacattagattc 252
Query: 181 cgttgcagcactggcgatgccatggggatgaacatagtgtccaaaggtgtccaaaatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cgttgcagcactggcgatgccatggggatgaacatagtgtccaaaggtgtccaaaatgta 312
Query: 241 cttgatttccttcagagcgacttccctgacatggatgttattggaatctctgg 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cttgatttccttcagagcgacttccctgacatggatgttattggaatctctgg 365
>gnl|LJGI|TC57918 similar to UniRef100_A9YVC3 Cluster: 3-hydroxy-3-methylglutaryl
coenzyme A reductase 3; n=1; Medicago truncatula|Rep:
3-hydroxy-3-methylglutaryl coenzyme A reductase 3 -
Medicago truncatula (Barrel medic), partial (74%)
Length = 1793
Score = 504 bits (254), Expect = e-142
Identities = 430/486 (88%), Gaps = 2/486 (0%)
Strand = Plus / Plus
Query: 157 ggcaagaatttgtacattagattccgttgcagcactggcgatgccatggggatgaacata 216
|||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 1137 ggcaagaatttgtacattagattctgttgcagcactggagatgccatggggatgaacatg 1196
Query: 217 gtgtccaaaggtgtccaaaatgtacttgatttccttca-gagcgacttccctgacatgga 275
|| ||||||||||||||||| ||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 1197 gtttccaaaggtgtccaaaacgtacttgctttccttcaagag-gacttccctgacatgga 1255
Query: 276 tgttattggaatctctggaaatttctgttccgacaagaaagctgcagctgtgaactggat 335
||||||||| || |||||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 1256 tgttattggcatttctggaaatttctgctcggacaagaaagcagcagctgtgaactggat 1315
Query: 336 tgaagggcgtggcaagtctgttgtctgcgaggctataattaaggaagaggtggtgaagaa 395
|||||||||||| |||||||| || |||||||| |||||||||||||||||||||||||
Sbjct: 1316 tgaagggcgtggtaagtctgtggtgtgcgaggccgtaattaaggaagaggtggtgaagaa 1375
Query: 396 ggtattaaagactagtgtggaggcactagtcgagcttaacatgcttaagaacctgactgg 455
|| || ||||| || |||||||| | || |||||||||||||| || ||||| |||||
Sbjct: 1376 agtgttgaagaccagcgtggaggccttggttgagcttaacatgctcaaaaaccttactgg 1435
Query: 456 ctcagcaattgctggtgctctgggtgggtttaatgcccatgctagcaacattgtcactgc 515
|||||| | || |||||||| ||||| || ||||||||||||||||| ||||| ||||
Sbjct: 1436 ctcagccgtggcaggtgctcttggtggcttcaatgcccatgctagcaatattgtttctgc 1495
Query: 516 tgtcttccttgccactggtcaggatcctgcacagaatgtggagagttctcaatgcatcac 575
||||| | | ||||| |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 1496 tgtctacttggccacgggtcaggatcctgctcagaatgtggagagttctcactgcatcac 1555
Query: 576 catgatggaagctgtgaatgatggcaaggaccttcacatttccgtcaccatgccttcgat 635
||||||||| || || || ||||||| || |||||| | ||||||||||||||||| ||
Sbjct: 1556 catgatggaggccgttaacgatggcagagatcttcacgtctccgtcaccatgccttccat 1615
Query: 636 tgaggt 641
||||||
Sbjct: 1616 tgaggt 1621
>gnl|LJGI|TC70601 homologue to UniRef100_A9YVC1 Cluster: 3-hydroxy-3-methylglutaryl
coenzyme A reductase 1; n=1; Medicago truncatula|Rep:
3-hydroxy-3-methylglutaryl coenzyme A reductase 1 -
Medicago truncatula (Barrel medic), partial (22%)
Length = 829
Score = 283 bits (143), Expect = 9e-76
Identities = 305/359 (84%)
Strand = Plus / Plus
Query: 512 ctgctgtcttccttgccactggtcaggatcctgcacagaatgtggagagttctcaatgca 571
||||||||| | | ||||| |||||||||||||| |||||||||||||||||||| ||||
Sbjct: 7 ctgctgtctacttggccacgggtcaggatcctgctcagaatgtggagagttctcactgca 66
Query: 572 tcaccatgatggaagctgtgaatgatggcaaggaccttcacatttccgtcaccatgcctt 631
||||||||||||| || || || ||||||| || |||||| | ||||||||||||||||
Sbjct: 67 tcaccatgatggaggccgttaacgatggcagagatcttcacgtctccgtcaccatgcctt 126
Query: 632 cgattgaggttggtactgttggagggggcacacaactcgcatctcagtcggcttgtctta 691
| |||||||| || || ||||| ||||||||||| ||||||||||| || || |||||||
Sbjct: 127 ccattgaggtgggcacagttggtgggggcacacagctcgcatctcaatcagcatgtctta 186
Query: 692 atttacttggtgtcaagggtgccagtaaagaagctccaggtgcaaattctaggctattgg 751
||||||||||||| ||||||||||| || || || ||||| |||||||||| | |||
Sbjct: 187 atttacttggtgtgaagggtgccagcaaggagttgccgggtgcgaattctaggcaactgg 246
Query: 752 ccaccatagtagctggttccgtccttgctggggagctatcactgatgtctgcaattgctg 811
| || ||| ||||||| | ||||| || ||||| || || || |||||||||||||| |
Sbjct: 247 caactataatagctggcgcagtcctcgccggggaactctccctcatgtctgcaattgcag 306
Query: 812 ccgggcaactcgttaagagccacatgaaatacaacagatctagcaaggatatctccaaa 870
| ||||| || || ||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 307 cagggcagcttgtgaagagccacatgaaatacaacaggtctagcaaggatatcaccaaa 365
>gnl|LJGI|TC73370 homologue to UniRef100_A7QPH4 Cluster: Chromosome chr18
scaffold_137, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_137, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (42%)
Length = 1155
Score = 266 bits (134), Expect = 2e-70
Identities = 539/674 (79%)
Strand = Plus / Plus
Query: 184 tgcagcactggcgatgccatggggatgaacatagtgtccaaaggtgtccaaaatgtactt 243
|||||||| || |||||||||||||||||||| || |||||||| || || ||||| |||
Sbjct: 12 tgcagcacgggtgatgccatggggatgaacatggtctccaaaggagttcagaatgttctt 71
Query: 244 gatttccttcagagcgacttccctgacatggatgttattggaatctctggaaatttctgt 303
|| |||||||| | || ||||||||||||||| ||||||| ||||||||||| | |||
Sbjct: 72 gacttccttcaaaatgatttccctgacatggatattattggcatctctggaaactattgt 131
Query: 304 tccgacaagaaagctgcagctgtgaactggattgaagggcgtggcaagtctgttgtctgc 363
|| ||||||||| |||| ||| | ||||||||||| || || || || || ||||| ||
Sbjct: 132 tcggacaagaaacctgctgctataaactggattgagggacggggtaaatcagttgtttgt 191
Query: 364 gaggctataattaaggaagaggtggtgaagaaggtattaaagactagtgtggaggcacta 423
|| || || || || ||||| ||||||||||||||||| ||||||| ||| | || ||
Sbjct: 192 gaagcaattatcaaagaagatgtggtgaagaaggtattgaagactaatgttgctgccctt 251
Query: 424 gtcgagcttaacatgcttaagaacctgactggctcagcaattgctggtgctctgggtggg 483
|| |||||||||||||| || ||||| |||| || || |||| ||| |||| |||||
Sbjct: 252 gtggagcttaacatgctcaaaaaccttgctggttctgctgttgccggtactctcggtgga 311
Query: 484 tttaatgcccatgctagcaacattgtcactgctgtcttccttgccactggtcaggatcct 543
|| || || |||||||| ||||| || |||| || || | ||||| ||||| ||||||
Sbjct: 312 ttcaacgcacatgctagtaacatagtttctgcagtatttttagccaccggtcaagatcct 371
Query: 544 gcacagaatgtggagagttctcaatgcatcaccatgatggaagctgtgaatgatggcaag 603
|| || ||||| || || || || ||||| || |||| |||||| || |||||||| |
Sbjct: 372 gcccaaaatgttgaaagctcccattgcataacaatgacggaagccgttaatgatggaaga 431
Query: 604 gaccttcacatttccgtcaccatgccttcgattgaggttggtactgttggagggggcaca 663
|||||||| || || || || |||||||| |||||||||||||||||||| || || ||
Sbjct: 432 gaccttcatatctcagtgactatgccttccattgaggttggtactgttggtggtgggact 491
Query: 664 caactcgcatctcagtcggcttgtcttaatttacttggtgtcaagggtgccagtaaagaa 723
||||| ||||||||||| ||||| | ||||| |||||||| ||||||||||| || ||
Sbjct: 492 caacttgcatctcagtccgcttgcttgaatttgcttggtgtgaagggtgccagcaaggag 551
Query: 724 gctccaggtgcaaattctaggctattggccaccatagtagctggttccgtccttgctggg 783
| ||||| ||||||| || || ||||||||| | || || || | || | || ||
Sbjct: 552 tcaccaggatcaaattcgagactcttggccaccgttgtcgccggagctgttttagccgga 611
Query: 784 gagctatcactgatgtctgcaattgctgccgggcaactcgttaagagccacatgaaatac 843
|| || || ||||||||||| |||||||| ||||| || || || |||||||||||||||
Sbjct: 612 gaactgtctctgatgtctgccattgctgcagggcagctagtgaacagccacatgaaatac 671
Query: 844 aacagatctagcaa 857
|||||||| |||||
Sbjct: 672 aacagatcaagcaa 685
>gnl|LJGI|TC59023 similar to UniRef100_Q1HB06 Cluster:
3-hydroxy-3-methylglutaryl-coenzyme A reductase; n=1;
Litchi chinensis|Rep:
3-hydroxy-3-methylglutaryl-coenzyme A reductase - Litchi
chinensis (Lychee), partial (49%)
Length = 1011
Score = 85.7 bits (43), Expect = 4e-16
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 31 actgcgaagagagctgcacagttgaaattctacctcgaagatcccctcaattttgattcc 90
||||| ||||| ||||||||||||||||||| | | || ||||| |||||||||||| |
Sbjct: 879 actgctaagagggctgcacagttgaaattcttcttggaggatcctctcaattttgataca 938
Query: 91 cttgctgttgttttcaataggtcaagcagatttgc 125
| |||||||||||||| |||||||| ||||||||
Sbjct: 939 ttggctgttgttttcaacaggtcaagtagatttgc 973