Miyakogusa Predicted Gene
- Lj0g3v0268859.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0268859.2 Non Chatacterized Hit- tr|I1LMP2|I1LMP2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57091 PE,95.79,0,26S
PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7,NULL; EUKARYOTIC
TRANSLATION INITIATION FACTOR 3 SUBU,CUFF.17763.2
(933 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72508 homologue to UniRef100_A7PP20 Cluster: Chromoso... 1047 0.0
gnl|LJGI|TC65832 homologue to UniRef100_A7PP20 Cluster: Chromoso... 1011 0.0
gnl|LJGI|FS338636 similar to UniRef100_A7PP20 Cluster: Chromosom... 315 3e-85
gnl|LJGI|TC81092 similar to UniRef100_Q8W424 Cluster: 26S protea... 293 1e-78
gnl|LJGI|BP053371 similar to UniRef100_Q8W424 Cluster: 26S prote... 204 7e-52
>gnl|LJGI|TC72508 homologue to UniRef100_A7PP20 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1143
Score = 1047 bits (528), Expect = 0.0
Identities = 804/896 (89%)
Strand = Plus / Plus
Query: 1 atggatgtgataaagacgcagcagatttcatcgagagcgatagagaaggtggtggtgcac 60
||||||||||||||||| ||||| | ||||| || |||| |||||||||||||| |||
Sbjct: 97 atggatgtgataaagactcagcaagtatcatctcgaccgatcgagaaggtggtggttcac 156
Query: 61 cctctcgtgttgctcagcatcgtcgataactacaaccgagtcgccaaggacacgcgcaag 120
|| || ||| | || ||||||||||| ||||||||| |||||||||||||||| || |||
Sbjct: 157 ccgctagtgcttctgagcatcgtcgacaactacaacagagtcgccaaggacacacggaag 216
Query: 121 cgcgtcgtcggcgttttgcttggttcgtcgttcaaaggcaccgttgatgtcaccaacagt 180
|||||||||||||| ||||| ||||| | |||||||||||||| || || |||||||
Sbjct: 217 cgcgtcgtcggcgtcttgctcggttccactttcaaaggcaccgtcgacgtttccaacagc 276
Query: 181 tacgccgtgccgtttgaagaagatgacaaggaccctagcatctggtttcttgaccacaat 240
|||||||| || |||||||||||||||||||| || |||||||||||||||||||| |||
Sbjct: 277 tacgccgttccctttgaagaagatgacaaggatccaagcatctggtttcttgaccataat 336
Query: 241 taccatgaatcaatgttctccatgtttaagagaatcaatgcgaaggagcatgttgtgggt 300
||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||
Sbjct: 337 taccatgaatcaatgttctccatgtttaagagaataaatgctaaggagcatgtcgtcggg 396
Query: 301 tggtatagcactggtcccaaactgcgagaaaatgacctcgacgttcatggtttattcaat 360
||||||||||||||||| |||||||| ||||||||||| ||| ||||||| ||||||||
Sbjct: 397 tggtatagcactggtccaaaactgcgtgaaaatgaccttgacattcatggactattcaat 456
Query: 361 gattatgttccaaatcctgttctggttataattgatgtggaacctaaagagttgggaatt 420
|| ||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||||
Sbjct: 457 gactatgtaccaaatcctgttttggttataattgatgttgaacctaaggagttgggaatt 516
Query: 421 cctacgaaagcttactatactgttgaagaggtcaaagagaatgctactcagaaaagccaa 480
|| || ||||| |||||| |||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 517 ccaacaaaagcatactatgctgtggaagaggttaaagagaatgctacccagaaaagccaa 576
Query: 481 aaggtctttgtgcatgtacaatcagaaattgctgctcatgaagttgaggaaataggagtt 540
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 577 aaggtctttgtgcatgtgcaatcagaaattgctgctcatgaagttgaggagataggagtg 636
Query: 541 gaacacttgcttagagatgtgaaggatacaaccattagcaccctcgcaacagaggttagt 600
|| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 637 gagcacttgcttagggatgtgaaggatacaaccattagcacccttgcaacagaggtaagt 696
Query: 601 gcaaaactcacagccttaaagggtttggatgcaaggcttaaagagataagaagttacctt 660
|||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 697 gcaaaacttacagccttgaagggtttggatgcaagacttaaagaaataaggggttacctt 756
Query: 661 gaccttgtcattgatggaaagcttcccttaaaccatgagatcctgtatcatctgcaggat 720
|||||||| ||||||||||||||||| |||||||||||||| |||| || ||||||||
Sbjct: 757 gaccttgttattgatggaaagcttccactaaaccatgagatcttgtaccacttgcaggat 816
Query: 721 gtatttaacctgttgccgaatcttaatgtctctgacctgatcaaggctttcgcagtgaaa 780
|| || |||||| | || ||||| ||||| |||| || ||||||||||| |||||||||
Sbjct: 817 gtgttcaacctgctaccaaatctcaatgttgctgatcttatcaaggcttttgcagtgaaa 876
Query: 781 acaaatgatatgatgctagtaatatacctatcgtctctcattagaagtgtgattgcactc 840
|| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 accaatgatatgatgttggtaatatacctatcgtctctcattagaagtgtgattgcactt 936
Query: 841 cacaacttgattaacaacaagatgctcaacaaagaacatgaaagggcagaagactc 896
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 937 cacaacttgattaacaacaagatgctcaacaaagaacatgaaagggaagaagactc 992
>gnl|LJGI|TC65832 homologue to UniRef100_A7PP20 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 681
Score = 1011 bits (510), Expect = 0.0
Identities = 524/526 (99%), Gaps = 2/526 (0%)
Strand = Plus / Plus
Query: 1 atggatgtgataaagacgcagcagatttcatcgagagcgatagagaaggtggtggtgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atggatgtgataaagacgcagcagatttcatcgagagcgatagagaaggtggtggtgcac 217
Query: 61 cctctcgtgttgctcagcatcgtcgataactacaaccgagtcgccaaggacacgcgcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 cctctcgtgttgctcagcatcgtcgataactacaaccgagtcgccaaggacacgcgcaag 277
Query: 121 cgcgtcgtcggcgttttgcttggttcgtcgttcaaaggcaccgttgatgtcaccaacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cgcgtcgtcggcgttttgcttggttcgtcgttcaaaggcaccgttgatgtcaccaacagt 337
Query: 181 tacgccgtgccgtttgaagaagatgacaaggaccctagcatctggtttcttgaccacaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tacgccgtgccgtttgaagaagatgacaaggaccctagcatctggtttcttgaccacaat 397
Query: 241 taccatgaatcaatgttctccatgtttaagagaatcaatgcgaaggagcatgttgtgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 taccatgaatcaatgttctccatgtttaagagaatcaatgcgaaggagcatgttgtgggt 457
Query: 301 tggtatagcactggtcccaaactgcgagaaaatgacctcgacgttcatggtttattcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tggtatagcactggtcccaaactgcgagaaaatgacctcgacgttcatggtttattcaat 517
Query: 361 gattatgttccaaatcctgttctggttataattgatgtggaacctaaagagttgggaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gattatgttccaaatcctgttctggttataattgatgtggaacctaaagagttgggaatt 577
Query: 421 cctacgaaagcttactatactgttgaagaggtcaaagagaatgctactcagaaaagccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cctacgaaagcttactatactgttgaagaggtcaaagagaatgctactcagaaaagccaa 637
Query: 481 aaggtctttgtgcatgtacaatcagaaattgctgctcatgaagttg 526
|| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 638 aa-gtctttgtgcatgtacaatcag-aattgctgctcatgaagttg 681
>gnl|LJGI|FS338636 similar to UniRef100_A7PP20 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 805
Score = 315 bits (159), Expect = 3e-85
Identities = 177/183 (96%)
Strand = Plus / Plus
Query: 535 ggagttgaacacttgcttagagatgtgaaggatacaaccattagcaccctcgcaacagag 594
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ggagttgaatacttgcttagagatgtgaaggatacaaccattagcaccctcgcaacagag 220
Query: 595 gttagtgcaaaactcacagccttaaagggtttggatgcaaggcttaaagagataagaagt 654
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 221 gtaagtgcaaaactcacagccttaaagggattggatgcaaggcttaaagagataagaagt 280
Query: 655 taccttgaccttgtcattgatggaaagcttcccttaaaccatgagatcctgtatcatctg 714
||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||
Sbjct: 281 taccttgaccttgtcattgatggaaagcttcccttgaaccatgcgatcttgtatcatctg 340
Query: 715 cag 717
|||
Sbjct: 341 cag 343
Score = 52.0 bits (26), Expect = 6e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 158 gcaccgttgatgtcaccaacagttacgccg 187
|||||||| |||||||||||||||||||||
Sbjct: 132 gcaccgttcatgtcaccaacagttacgccg 161
>gnl|LJGI|TC81092 similar to UniRef100_Q8W424 Cluster: 26S proteasome regulatory
particle non-ATPase subunit8; n=1; Oryza sativa Japonica
Group|Rep: 26S proteasome regulatory particle non-ATPase
subunit8 - Oryza sativa subsp. japonica (Rice), partial
(15%)
Length = 446
Score = 293 bits (148), Expect = 1e-78
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 786 tgatatgatgctagtaatatacctatcgtctctcattagaagtgtgattgcactccacaa 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatatgatgctagtaatatacctatcgtctctcattagaagtgtgattgcactccacaa 60
Query: 846 cttgattaacaacaagatgctcaacaaagaacatgaaagggcagaagactcaaaatcagt 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttgattaacaacaagatgctcaacaaagaacatgaaagggcagaagactcaaaatcagt 120
Query: 906 gcctgtaccaagtgcagcagcaagttga 933
||||||||||||||||||||||||||||
Sbjct: 121 gcctgtaccaagtgcagcagcaagttga 148
>gnl|LJGI|BP053371 similar to UniRef100_Q8W424 Cluster: 26S proteasome regulatory
particle non-ATPase subunit8; n=1; Oryza sativa Japonica
Group|Rep: 26S proteasome regulatory particle non-ATPase
subunit8 - Oryza sativa subsp. japonica (Rice), partial
(22%)
Length = 568
Score = 204 bits (103), Expect = 7e-52
Identities = 161/181 (88%)
Strand = Plus / Minus
Query: 716 aggatgtatttaacctgttgccgaatcttaatgtctctgacctgatcaaggctttcgcag 775
||||||| || |||||| | || ||||| ||||| |||| || ||||||||||| ||||
Sbjct: 383 aggatgtgttcaacctgctaccaaatctcaatgttgctgatcttatcaaggcttttgcag 324
Query: 776 tgaaaacaaatgatatgatgctagtaatatacctatcgtctctcattagaagtgtgattg 835
||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgaaaaccnatgatatgatgttggtaatatacctatcgtctctcattagaagtgtgattg 264
Query: 836 cactccacaacttgattaacaacaagatgctcaacaaagaacatgaaagggcagaagact 895
|||| ||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||||
Sbjct: 263 cacttcacgacttgattaacnacaagatgctcaaccaagaacatgaaagggaagaagact 204
Query: 896 c 896
|
Sbjct: 203 c 203