Miyakogusa Predicted Gene
- Lj0g3v0268659.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0268659.2 tr|G7JHT2|G7JHT2_MEDTR Dual specificity protein
kinase pyk2 OS=Medicago truncatula GN=MTR_4g116520 P,67.25,0,Protein
kinase-like (PK-like),Protein kinase-like domain; CAD & PB1
domains,NULL; seg,NULL; PROTEIN_,CUFF.17750.2
(3360 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72246 homologue to UniRef100_A7QS17 Cluster: Chromoso... 753 0.0
gnl|LJGI|FS356137 weakly similar to UniRef100_A7Q6K4 Cluster: Ch... 135 2e-30
gnl|LJGI|TC82647 similar to UniRef100_A7NXT1 Cluster: Chromosome... 58 4e-07
>gnl|LJGI|TC72246 homologue to UniRef100_A7QS17 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(24%)
Length = 1626
Score = 753 bits (380), Expect = 0.0
Identities = 609/684 (89%), Gaps = 1/684 (0%)
Strand = Plus / Plus
Query: 2645 tgcaggttataaagaactgtcaccttgaagagctgacagaattgggttctggtacctttg 2704
|||||||||||||||| || |||||||||| |||| ||||||||||||||| |||||||
Sbjct: 425 tgcaggttataaagaatggtgaccttgaagaactgatagaattgggttctgggacctttg 484
Query: 2705 ggactgtttaccatggaaaatggaggggcactgatgttgcaatcaaacgaattactgata 2764
||||||| || ||||||||||||||||| |||||||| ||||| || || |||| ||||
Sbjct: 485 ggactgtatatcatggaaaatggaggggtactgatgtagcaataaagcggattaacgata 544
Query: 2765 ggtgttttgcgggaaagccttcagagcaagagcgcatgagagatgacttctggaatgagg 2824
||||||| || |||||||||||||||||||||||| |||||| |||||| ||||||||||
Sbjct: 545 ggtgtttcgctggaaagccttcagagcaagagcgcttgagagctgacttttggaatgagg 604
Query: 2825 caatcaagcttgctgacttgcaccatccaaatgtggtagctttctacggtgtcgtgcttg 2884
|||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 605 caatcaagctggcggacttgcaccatccaaatgtggtagctttctatggtgttgtgcttg 664
Query: 2885 atggcccaggaggttctgtggcaacagtaactgagtatatggctaatggttctctaagaa 2944
||||||| ||||| ||||||||||||||||| ||||| |||| |||||||||||| ||||
Sbjct: 665 atggccccggaggctctgtggcaacagtaacagagtacatggttaatggttctctgagaa 724
Query: 2945 atgccttgcagaagagtgagaggaatcttgacaagcgcaaacgtcttatcattgcaatgg 3004
||||||||||||||| || |||||| |||||||||||||| |||||| | |||| |||||
Sbjct: 725 atgccttgcagaagaatgggaggaaccttgacaagcgcaagcgtcttctaattgtaatgg 784
Query: 3005 atgtggcctttggtatggagtacctacatggaaaaaacattgtacactttgacttgaaaa 3064
||||||||||||||||||||||||| ||||| |||||||| || ||||| ||||||||||
Sbjct: 785 atgtggcctttggtatggagtacctgcatgggaaaaacatagtgcacttcgacttgaaaa 844
Query: 3065 gtgacaacttgctggtgaatctccgagatccacaccgcccaatatgcaaggttggtgact 3124
||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 845 gtgacaacttgcttgtgaatcttcgagatccacatcgcccaatatgcaaggttggtgact 904
Query: 3125 tgggactgtccaaagtaaaatgtcagacattgatctctggcggtgtgagaggaactctac 3184
|||| ||||||||||| ||||| ||||| | || ||||| || ||||||||||||||||
Sbjct: 905 tgggtctgtccaaagtgaaatgccagactctaatatctggtggcgtgagaggaactctac 964
Query: 3185 cgtggatggcgccagaactactaaacggaagcagtagccttgtttcagagaaggttgatg 3244
| |||||||| |||||||| || || || |||||||||||||||||||||||||||||||
Sbjct: 965 cttggatggccccagaactgctgaatgggagcagtagccttgtttcagagaaggttgatg 1024
Query: 3245 tcttttcattcggtattgtgctgtgggaa-ctcttaactggagaagagccatatgctgat 3303
| |||||||| || ||||| |||||||| ||| | || |||||||| || |||||||||
Sbjct: 1025 tattttcatttggcattgtcatgtgggaacctcctgacaggagaagaaccttatgctgat 1084
Query: 3304 ttgcactatggtgctattataggt 3327
|| |||||||| || || ||||||
Sbjct: 1085 ttacactatggagccataataggt 1108
Score = 69.9 bits (35), Expect = 1e-10
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 2280 gaaagaaacctattctcccagggatcactttggtgagaatccaggcagctttgggaaaca 2339
||||||||| ||||||| | |||||| |||||||||||| |||| | | |||| ||||
Sbjct: 39 gaaagaaacttattctcataaggatcagtttggtgagaatacagggaacactggggaaca 98
Query: 2340 aatttcagaagcacaattggatgaaggcctctacc 2374
|| || |||||| ||||||||||| ||||||||||
Sbjct: 99 aaatttagaagctcaattggatgatggcctctacc 133
>gnl|LJGI|FS356137 weakly similar to UniRef100_A7Q6K4 Cluster: Chromosome chr11
scaffold_56, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_56, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 537
Score = 135 bits (68), Expect = 2e-30
Identities = 134/156 (85%)
Strand = Plus / Minus
Query: 2801 tgagagatgacttctggaatgaggcaatcaagcttgctgacttgcaccatccaaatgtgg 2860
||||||||||||| ||||||| || ||||||||| | ||||||||||||||||||||||
Sbjct: 383 tgagagatgacttttggaatggggaaatcaagctgacagacttgcaccatccaaatgtgg 324
Query: 2861 tagctttctacggtgtcgtgcttgatggcccaggaggttctgtggcaacagtaactgagt 2920
|||||||||| ||||| |||| ||| ||||| |||| ||||||| |||| |||| |||
Sbjct: 323 tagctttctatggtgttatgctagatagcccacgaggctctgtggaaacaataacaaagt 264
Query: 2921 atatggctaatggttctctaagaaatgccttgcaga 2956
|||||| |||||||||| | ||||||| | ||||||
Sbjct: 263 atatggttaatggttctttgagaaatgacatgcaga 228
>gnl|LJGI|TC82647 similar to UniRef100_A7NXT1 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 1460
Score = 58.0 bits (29), Expect = 4e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 2692 tctggtacctttgggactgtttaccatggaaaatggaggggcactgatgttgc 2744
|||||||| | ||| ||||||||||||||||||||| |||| || ||||||||
Sbjct: 260 tctggtacttatggaactgtttaccatggaaaatggcggggaacagatgttgc 312