Miyakogusa Predicted Gene

Lj0g3v0268649.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0268649.1 tr|B9HAE3|B9HAE3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_561276 PE=4
SV=1,46.53,2e-18,seg,NULL,CUFF.17748.1
         (432 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72359 similar to UniRef100_A7QS16 Cluster: Chromosome...   848   0.0  

>gnl|LJGI|TC72359 similar to UniRef100_A7QS16 Cluster: Chromosome undetermined
           scaffold_155, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_155,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (26%)
          Length = 502

 Score =  848 bits (428), Expect = 0.0
 Identities = 431/432 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggcagcatcctacgagagaaaaccactggtgatggaaatggaacatgaagaagatttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 atggcagcatcctacgagagaaaaccactggtgatggaaatggaacatgaagaagatttt 415

                                                                       
Query: 61  gaagaagccagtggtagtggatgtgggtgtggatgcttcaagggtttcaacttgaagtgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gaagaagccagtggtagtggatgtgggtgtggatgcttcaagggtttcaacttgaagtgg 355

                                                                       
Query: 121 tggcagagccatgaagaagaaggtaaacgcttaattgatcaaaacggaggaggaggagag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tggcagagccatgaagaagaaggtaaacgcttaattgatcaaaacggaggaggaggagag 295

                                                                       
Query: 181 ggatggatggtggagaagatgaagaaggtgaaagaggcttcagaagtgattgctggacca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ggatggatggtggagaagatgaagaaggtgaaagaggcttcagaagtgattgctggacca 235

                                                                       
Query: 241 aagtggaagaatttcattagaaagataagtgggcagcagaagaagaagaggttccagtat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 aagtggaagaatttcattagaaagataagtgggcagcagaagaagaagaggttccagtat 175

                                                                       
Query: 301 gatgaacagagctatgctctgaattttaacagcagggctgagagcgaagatgatgaagac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 gatgaacagagctatgctctgaattttaacagcagggctgagagcgaagatgatgaagac 115

                                                                       
Query: 361 atgcctcccaggttctcagctagattctctgctccttttcctgctggtcgccgccaaaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 114 atgcctcccaggttctcagctagattctctgctccttttcctgctggtcaccgccaaaat 55

                       
Query: 421 ggaacatcatga 432
           ||||||||||||
Sbjct: 54  ggaacatcatga 43