Miyakogusa Predicted Gene

Lj0g3v0268089.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0268089.1 tr|A9RUT5|A9RUT5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_70836
,36.09,4e-17,PRA1,Prenylated rab acceptor PRA1; seg,NULL,CUFF.17701.1
         (600 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77317 similar to UniRef100_A7P1R6 Cluster: Chromosome...  1110   0.0  
gnl|LJGI|DC594476 similar to UniRef100_A7P1R6 Cluster: Chromosom...   420   e-117

>gnl|LJGI|TC77317 similar to UniRef100_A7P1R6 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (86%)
          Length = 1056

 Score = 1110 bits (560), Expect = 0.0
 Identities = 560/560 (100%)
 Strand = Plus / Plus

                                                                       
Query: 41  ccgccgcaacctccaattccgccccgatacccaccaccggtctcttctctcgcctcgtga 100
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ccgccgcaacctccaattccgccccgatacccaccaccggtctcttctctcgcctcgtga 200

                                                                       
Query: 101 ccctcctctccctcttcactctcaaccccttttctaagctcaccgccgaggatttcgccg 160
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctcctctccctcttcactctcaaccccttttctaagctcaccgccgaggatttcgccg 260

                                                                       
Query: 161 gcgacaccccttcttggtcccgctccttcatcggcttctgcggctcctactccttccctt 220
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgacaccccttcttggtcccgctccttcatcggcttctgcggctcctactccttccctt 320

                                                                       
Query: 221 cctctccctcccaagctcgcttcagggtcctcgaaaatgtcaagcgttacgctcgcaact 280
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctctccctcccaagctcgcttcagggtcctcgaaaatgtcaagcgttacgctcgcaact 380

                                                                       
Query: 281 acgccttcctcttcatcgttttcttcgcttgcgctttgtataagatgcctcttgcccttg 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acgccttcctcttcatcgttttcttcgcttgcgctttgtataagatgcctcttgcccttg 440

                                                                       
Query: 341 ttgggttgatttcatgtttggcattgtgggatttcttcaagtattgtagtgatagatggg 400
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgggttgatttcatgtttggcattgtgggatttcttcaagtattgtagtgatagatggg 500

                                                                       
Query: 401 ggttggatcaatatcctctcattcgacagtgtttgcttcgcattgcgcaatgtgcaacag 460
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggttggatcaatatcctctcattcgacagtgtttgcttcgcattgcgcaatgtgcaacag 560

                                                                       
Query: 461 cagttattctaatattttccaatgttcaaatggctctcttttgtgcattaagtgtcggct 520
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagttattctaatattttccaatgttcaaatggctctcttttgtgcattaagtgtcggct 620

                                                                       
Query: 521 atgcaggtgtgatactgcatgctgcatttcggaagttgacccctgtaaagcccccttctt 580
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgcaggtgtgatactgcatgctgcatttcggaagttgacccctgtaaagcccccttctt 680

                               
Query: 581 caagcagaagtagatagttg 600
           ||||||||||||||||||||
Sbjct: 681 caagcagaagtagatagttg 700


>gnl|LJGI|DC594476 similar to UniRef100_A7P1R6 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (28%)
          Length = 579

 Score =  420 bits (212), Expect = e-117
 Identities = 212/212 (100%)
 Strand = Plus / Plus

                                                                       
Query: 243 cagggtcctcgaaaatgtcaagcgttacgctcgcaactacgccttcctcttcatcgtttt 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cagggtcctcgaaaatgtcaagcgttacgctcgcaactacgccttcctcttcatcgtttt 60

                                                                       
Query: 303 cttcgcttgcgctttgtataagatgcctcttgcccttgttgggttgatttcatgtttggc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cttcgcttgcgctttgtataagatgcctcttgcccttgttgggttgatttcatgtttggc 120

                                                                       
Query: 363 attgtgggatttcttcaagtattgtagtgatagatgggggttggatcaatatcctctcat 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgtgggatttcttcaagtattgtagtgatagatgggggttggatcaatatcctctcat 180

                                           
Query: 423 tcgacagtgtttgcttcgcattgcgcaatgtg 454
           ||||||||||||||||||||||||||||||||
Sbjct: 181 tcgacagtgtttgcttcgcattgcgcaatgtg 212