Miyakogusa Predicted Gene
- Lj0g3v0267639.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0267639.1 Non Chatacterized Hit- tr|A5AHX3|A5AHX3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,28.19,1e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; no description,Tetratricopeptide-like,gene.g20769.t1.1
(1110 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO030841 weakly similar to UniRef100_A7R617 Cluster: Ch... 315 3e-85
gnl|LJGI|GO037297 weakly similar to UniRef100_A7Q622 Cluster: Ch... 206 2e-52
gnl|LJGI|TC82599 weakly similar to UniRef100_A7PJG0 Cluster: Chr... 153 3e-36
gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Ch... 147 2e-34
gnl|LJGI|BP047039 weakly similar to UniRef100_Q1SMZ4 Cluster: Te... 133 3e-30
gnl|LJGI|FS333759 weakly similar to UniRef100_A7Q622 Cluster: Ch... 131 1e-29
gnl|LJGI|FS336741 weakly similar to UniRef100_A7QVP2 Cluster: Ch... 121 1e-26
gnl|LJGI|AV429083 weakly similar to UniRef100_A7QQ24 Cluster: Ch... 109 4e-23
gnl|LJGI|FS342564 weakly similar to UniRef100_A7Q622 Cluster: Ch... 107 1e-22
gnl|LJGI|AV766731 weakly similar to UniRef100_A7P2U1 Cluster: Ch... 92 9e-18
gnl|LJGI|AV772727 weakly similar to UniRef100_Q2HVJ3 Cluster: Te... 66 5e-10
gnl|LJGI|TC77080 weakly similar to UniRef100_A7QVP2 Cluster: Chr... 62 8e-09
>gnl|LJGI|GO030841 weakly similar to UniRef100_A7R617 Cluster: Chromosome undetermined
scaffold_1129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 688
Score = 315 bits (159), Expect = 3e-85
Identities = 414/499 (82%)
Strand = Plus / Minus
Query: 597 ttctcttattgatggtttgtgcaaattagggagaatctctgatgcttggaagcttgttaa 656
||||||||| |||||||||||||||| ||||||||| |||||||||||| | |||||| |
Sbjct: 659 ttctcttatagatggtttgtgcaaatcagggagaatatctgatgcttgggatcttgttga 600
Query: 657 tgagatgcatcatagaggtacaccacctgatgttatcacttacaaccctttacttgatgt 716
|||||||||| ||||||| |||||||||||| ||||| ||||| ||||| | ||||
Sbjct: 599 tgagatgcattgtagaggtcaaccacctgatgtaatcacatacaattctttattggatgc 540
Query: 717 tttatgcaaaagccataatgttgacaaggcaattgcattaatcaaggaaattcaagatca 776
|||||||||||||||| ||||||||| ||||||| | || |||||| |||| |||| ||
Sbjct: 539 tttatgcaaaagccatcatgttgacagggcaatttctttgatcaagaaaatgaaagacca 480
Query: 777 gggtattaagccagatgtctttacatacactatactaattgatggactatgcaaagtagg 836
|||| || | || | ||||||| |||||| || |||||||||||||||| |||
Sbjct: 479 gggtcttcaaccttcgatgcacacatacaatatacttatggatggactatgcaaagcagg 420
Query: 837 aagacttaaggatgctcaggagatttttcaggatattttaataaaaggctacaatgtaac 896
||| || || |||| || ||| ||||||||||| ||||||| |||||||||||| ||
Sbjct: 419 cagagttgagaatgcacaagaggtttttcaggatcttttaattaaaggctacaatttaga 360
Query: 897 tgtccaggcatacacagttatgatcaatgggtattgcaaagagggcttgtgtgatgaagc 956
||| | | | || ||| ||||||| |||||| ||| ||||||||||||| |||||||||
Sbjct: 359 tgtacggtcgtatacaattatgattaatgggctttgtaaagagggcttgtttgatgaagc 300
Query: 957 attggcattgatttcaaaaatggagagcagcggtcgtatgcctgatgctgtaacttatga 1016
|||| || |||| ||||||||||| | || |||| | || ||| | ||||||||||||||
Sbjct: 299 attgacactgatgtcaaaaatggaaaacaacggttgcatccctaacgctgtaacttatga 240
Query: 1017 aataattattcgagctctttttgaaaaaggtgagaatgataagggagagaagcttcttcg 1076
|||||| ||||| ||||| ||| |||||||||| |||| ||||| |||||||||||| ||
Sbjct: 239 aataataattcgtgctctctttcaaaaaggtgacaatgttaaggtagagaagcttctccg 180
Query: 1077 tgaaatggttgctagaggt 1095
|||||||| ||||||||||
Sbjct: 179 tgaaatggctgctagaggt 161
>gnl|LJGI|GO037297 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 537
Score = 206 bits (104), Expect = 2e-52
Identities = 308/376 (81%)
Strand = Plus / Plus
Query: 41 aattggttaagcctgatgtggtaatgtacactacaatcattgatagcttgtgtaaagata 100
|||| ||| ||||||||||||| ||||||| ||||||||||||||| | || |||||||
Sbjct: 158 aattagttcagcctgatgtggtcatgtacagcacaatcattgatagcctctgcaaagata 217
Query: 101 aacttgtaagtgatgcatatgacttatattctgaaatggttgccaagagaattccaccta 160
|||||||||||||||| | || |||||||| |||||||| |||||||||| | ||||
Sbjct: 218 aacttgtaagtgatgcctgcgatttatattcggaaatggtactcaagagaatttctccta 277
Query: 161 atgctgtgacttatacttcattgatatatggcttttgcattgttggtcaattgcaacaag 220
|| ||| |||| | | | | || ||||||||||||||||| ||||||||| || |||
Sbjct: 278 ctgttgtcactttcaatgctctaatttatggcttttgcattgtgggtcaattgaaagaag 337
Query: 221 cggttggtttgttaaacgaaatgattttgaaacgcatggacgtggaagttcatactttta 280
| ||||||||| |||| |||||| | |||||| ||| || ||| |||||||||
Sbjct: 338 cagttggtttgctaaatgaaatggtgttgaaaaacatcaacccaattgttaatactttta 397
Query: 281 atatattggttgatgctttatgtaaggaaggaaatgtgaaagaagcaaaaaatgtgtttg 340
|||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 398 atattctggttgatgggttatgtaaggaaggaaaggtgaaagaagctaaaaatgtgttag 457
Query: 341 ctgtgatgatgaaacaaggtgtgaaacctaatactgttagttatagttctttgatggatg 400
|||||||||||||| ||||||| || ||| ||| | | | ||| | |||| | |||||||
Sbjct: 458 ctgtgatgatgaaagaaggtgtaaagcctgatattttcacttacaattctatcatggatg 517
Query: 401 ggtattgtctagttaa 416
||||||| ||||||||
Sbjct: 518 ggtattgcctagttaa 533
>gnl|LJGI|TC82599 weakly similar to UniRef100_A7PJG0 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 1411
Score = 153 bits (77), Expect = 3e-36
Identities = 233/285 (81%)
Strand = Plus / Plus
Query: 799 acatacactatactaattgatggactatgcaaagtaggaagacttaaggatgctcaggag 858
||||||| |||||| || |||||||| ||||||| ||||||||||||| |||| || ||
Sbjct: 20 acatacagtatacttatggatggactgtgcaaagaaggaagacttaagaatgcacaagat 79
Query: 859 atttttcaggatattttaataaaaggctacaatgtaactgtccaggcatacacagttatg 918
||||||||||| |||||| |||||||| |||||||||||| | ||| || |||||
Sbjct: 80 gtttttcaggatcttttaactaaaggctatcatgtaactgtcccgatatatactattatg 139
Query: 919 atcaatgggtattgcaaagagggcttgtgtgatgaagcattggcattgatttcaaaaatg 978
||||||||| ||| |||||||| |||| ||||||||||||||| ||| | || ||||||
Sbjct: 140 atcaatgggctttgtaaagagggtttgtttgatgaagcattggccttgctgtctaaaatg 199
Query: 979 gagagcagcggtcgtatgcctgatgctgtaacttatgaaataattattcgagctcttttt 1038
|| || ||| | |||||| ||||| |||||| |||| ||| ||||| ||||| |||
Sbjct: 200 gaagacaatggttgcatgcctaatgctataactttcgaaacaatcattcgtgctctattt 259
Query: 1039 gaaaaaggtgagaatgataagggagagaagcttcttcgtgaaatg 1083
|| || ||||||||| ||| || |||||| ||||| |||||||||
Sbjct: 260 gagaagggtgagaattatatggcagagaaacttctacgtgaaatg 304
>gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 802
Score = 147 bits (74), Expect = 2e-34
Identities = 209/254 (82%)
Strand = Plus / Plus
Query: 47 ttaagcctgatgtggtaatgtacactacaatcattgatagcttgtgtaaagataaacttg 106
|||| ||||||||||||||||||| | |||||||||||| ||||||||||||||||||
Sbjct: 547 ttaaacctgatgtggtaatgtacagcatcatcattgatagcctgtgtaaagataaacttg 606
Query: 107 taagtgatgcatatgacttatattctgaaatggttgccaagagaattccacctaatgctg 166
|||||||||| | | ||||||||||||||| ||| |||| |||| | ||| ||| ||
Sbjct: 607 taagtgatgcttgcaatttatattctgaaatgattgtcaagggaatatctcctgatgttg 666
Query: 167 tgacttatacttcattgatatatggcttttgcattgttggtcaattgcaacaagcggttg 226
| || || | | | || |||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 667 tcacgtacaatgctttaatatatggcttttgcattgttggtcaattgaaacaagcaattg 726
Query: 227 gtttgttaaacgaaatgattttgaaacgcatggacgtggaagttcatacttttaatatat 286
| ||| || | |||||| | |||||| ||| ||| || ||| |||||| ||||||||
Sbjct: 727 ggttgctagatgaaatggtattgaaaaacatagacccagatgtttatacttataatatat 786
Query: 287 tggttgatgcttta 300
|||| |||||||||
Sbjct: 787 tggtcgatgcttta 800
>gnl|LJGI|BP047039 weakly similar to UniRef100_Q1SMZ4 Cluster: Tetratricopeptide-like
helical; n=1; Medicago truncatula|Rep:
Tetratricopeptide-like helical - Medicago truncatula
(Barrel medic), partial (9%)
Length = 527
Score = 133 bits (67), Expect = 3e-30
Identities = 151/179 (84%)
Strand = Plus / Minus
Query: 915 tatgatcaatgggtattgcaaagagggcttgtgtgatgaagcattggcattgatttcaaa 974
|||||||||||| ||| ||||||||||||| ||||||||||||| ||||||| || ||
Sbjct: 478 tatgatcaatggactttgtaaagagggcttgtttgatgaagcattgacattgatgtcgaa 419
Query: 975 aatggagagcagcggtcgtatgcctgatgctgtaacttatgaaataattattcgagctct 1034
|||||| || ||| | || | |||| | |||||| ||||| ||||||| |||||
Sbjct: 418 aatggaagacaatggttgcatccatgatccaataacttttgaaacaattatttctgctct 359
Query: 1035 ttttgaaaaaggtgagaatgataagggagagaagcttcttcgtgaaatggttgctagag 1093
||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 358 ttttgaaaaaggtgaaaatgataaggcagagaagcttcttcgtgaaatgattgctagag 300
>gnl|LJGI|FS333759 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 766
Score = 131 bits (66), Expect = 1e-29
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 41 aattggttaagcctgatgtggtaatgtacactacaatcattgatagcttgtgtaaagata 100
||||||| |||||| ||||||||||||||| || ||||||||||||||||| |||||||
Sbjct: 608 aattggtaaagcctaatgtggtaatgtacaacactatcattgatagcttgtgcaaagata 667
Query: 101 aacttgtaagtgatgcatatgacttatattctgaaatggttgccaagaga 150
||||||| |||||||| | | | |||||||||||||||||||||||||||
Sbjct: 668 aacttgttagtgatgcgtttaatttatattctgaaatggttgccaagaga 717
>gnl|LJGI|FS336741 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 760
Score = 121 bits (61), Expect = 1e-26
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 47 ttaagcctgatgtggtaatgtacactacaatcattgatagcttgtgtaaagataaacttg 106
|||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||
Sbjct: 600 ttaaacctgatgtggtaatgtacagcacaatcatcgatagcctgtgtaaagataaacttg 659
Query: 107 taagtgatgcatatgacttatattctgaaatggttgccaagagaattccacctaatgctg 166
||||| |||| | | ||||||||||||||| |||||||| |||| | ||||||| |
Sbjct: 660 taagtcatgcttgcaatttatattctgaaatgcttgccaagggaatatctcctaatgtag 719
Query: 167 tgacttatacttcattgatatatggcttttgcattgttggt 207
| || || | | | || ||||||||||||||||||||||||
Sbjct: 720 tcacgtacagtgctttaatatatggcttttgcattgttggt 760
>gnl|LJGI|AV429083 weakly similar to UniRef100_A7QQ24 Cluster: Chromosome chr2
scaffold_140, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_140, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 300
Score = 109 bits (55), Expect = 4e-23
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 277 tttaatatattggttgatgctttatgtaaggaaggaaatgtgaaagaagcaaaaaatgtg 336
|||||||||||||||||||||||||||||| ||||||| |||||| | || || ||||||
Sbjct: 54 tttaatatattggttgatgctttatgtaagaaaggaaaggtgaaacatgctaagaatgtg 113
Query: 337 tttgctgtgatgatgaaacaaggtgtg 363
|| ||||||||||| ||||||||||||
Sbjct: 114 ttggctgtgatgataaaacaaggtgtg 140
>gnl|LJGI|FS342564 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 785
Score = 107 bits (54), Expect = 1e-22
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 44 tggttaagcctgatgtggtaatgtacactacaatcattgatagcttgtgtaaagataaac 103
||||||||||||||||||||||||||| | | |||||||| ||||||| ||||||||||
Sbjct: 639 tggttaagcctgatgtggtaatgtacaattctatcattgactgcttgtgcaaagataaac 698
Query: 104 ttgtaagtgatgcatatgacttatattctgaaatggttgccaagagaatt 153
|||||| ||||| ||||| || ||||||||||||||| |||| |||||
Sbjct: 699 ttgtaaccgatgcctatgatctacattctgaaatggttgtcaagggaatt 748
>gnl|LJGI|AV766731 weakly similar to UniRef100_A7P2U1 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 576
Score = 91.7 bits (46), Expect = 9e-18
Identities = 223/282 (79%)
Strand = Plus / Minus
Query: 812 taattgatggactatgcaaagtaggaagacttaaggatgctcaggagatttttcaggata 871
|||||||||||||||||||||| ||||| |||||| ||| || ||||||||||||| |
Sbjct: 318 taattgatggactatgcaaagttggaaggcttaagattgcccaagagatttttcaggttc 259
Query: 872 ttttaataaaaggctacaatgtaactgtccaggcatacacagttatgatcaatgggtatt 931
|||| | ||||||||||| ||| |||| | | || || |||||||||||||||||||
Sbjct: 258 ttttgagcgaaggctacaatttaaatgtcatgacgtatactgttatgatcaatgggtatt 199
Query: 932 gcaaagagggcttgtgtgatgaagcattggcattgatttcaaaaatggagagcagcggtc 991
| ||||| || || |||||| || ||| || | ||||||||||| || |||
Sbjct: 198 gtaaagaaggtttacttgatgaggctcaggccctgctgtcaaaaatggaagacaatggtt 139
Query: 992 gtatgcctgatgctgtaacttatgaaataattattcgagctctttttgaaaaaggtgaga 1051
| || ||| ||||||| | || | ||| ||| ||| | ||||| ||||||||| |||||
Sbjct: 138 gcattcctaatgctgtgaattttcaaacaataatttgtgctctctttgaaaaaaatgaga 79
Query: 1052 atgataagggagagaagcttcttcgtgaaatggttgctagag 1093
||||||||| ||||| ||| ||||||||||| |||||||||
Sbjct: 78 atgataaggcagagagactttttcgtgaaatgattgctagag 37
>gnl|LJGI|AV772727 weakly similar to UniRef100_Q2HVJ3 Cluster: Tetratricopeptide-like
helical; n=1; Medicago truncatula|Rep:
Tetratricopeptide-like helical - Medicago truncatula
(Barrel medic), partial (12%)
Length = 528
Score = 65.9 bits (33), Expect = 5e-10
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 799 acatacactatactaattgatggactatgcaaagtaggaagacttaaggatgctcaggag 858
||||||| |||| | |||||||||||||||||| |||||| | |||||||| || |||
Sbjct: 416 acatacaatataattattgatggactatgcaaaagtggaagagtaaaggatgcacaagag 357
Query: 859 atttttcaggatattttaataaaaggcta 887
||||||||||| |||| || ||||||||
Sbjct: 356 ctttttcaggatcttttgattaaaggcta 328
Score = 52.0 bits (26), Expect = 8e-06
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 998 ctgatgctgtaacttatgaaataattattcgagctctttttgaaaaaggtgagaatgata 1057
|||||||| |||||||||||| ||||||||| | ||| ||| |||| |||||||||||
Sbjct: 216 ctgatgctataacttatgaaacaattattcgggttctctttagaaaaaatgagaatgata 157
Query: 1058 agggagagaagcttcttcgtgaaatggttgctagaggt 1095
| | | ||| ||||||| ||| ||| ||||||||||
Sbjct: 156 aagcacagacacttcttcatgagatgaatgctagaggt 119
>gnl|LJGI|TC77080 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 898
Score = 61.9 bits (31), Expect = 8e-09
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 63 aatgtacactacaatcattgatagcttgtgtaaagataaacttgtaagtgatgcatatga 122
|||||||| |||||||||| | ||| |||| |||||||| |||||||||||| |||||
Sbjct: 511 aatgtacaatacaatcattaaaagcatgtgcgaagataaatgtgtaagtgatgcgtatga 570
Query: 123 cttatattctgaaatggttgccaagagaatt 153
|||||| ||||||| || ||||||||||
Sbjct: 571 tttatataatgaaatgcttctcaagagaatt 601