Miyakogusa Predicted Gene
- Lj0g3v0267459.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0267459.1 Non Chatacterized Hit- tr|F6HW90|F6HW90_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,50.49,2e-19,BRX,Brevis radix-like domain; REGULATOR OF CHROMOSOME
CONDENSATION (RCC1),NULL; REGULATOR OF CHROMOS,CUFF.17657.1
(510 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71090 similar to UniRef100_A7PQZ5 Cluster: Chromosome... 831 0.0
gnl|LJGI|TC69697 similar to UniRef100_A7PQZ5 Cluster: Chromosome... 351 3e-96
gnl|LJGI|TC80419 similar to UniRef100_A7PQZ5 Cluster: Chromosome... 105 3e-22
>gnl|LJGI|TC71090 similar to UniRef100_A7PQZ5 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 817
Score = 831 bits (419), Expect = 0.0
Identities = 440/447 (98%)
Strand = Plus / Plus
Query: 64 ggttccgaccttggttccaatgacgttaccaatgctacgattgatcaattgactattcaa 123
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 ggttccgactttggttccaatgacgtcaccaatgctacgattgatcaattgactattcaa 60
Query: 124 acaagaagccaagagtcagacttaacaggatcaaatgaccagttgctttcaaatggatca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaagaagccaagagtcagacttaacaggatcaaatgaccagttgctttcaaatggatca 120
Query: 184 agcactatcaccaaccgtagtgcaggtcacggtaaacacagtcaatcaaatgcaactagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcactatcaccaaccgtagtgcaggtcacggtaaacacagtcaatcaaatgcaactagc 180
Query: 244 agaaatgggtacaaaacaaaggataacgagtctcgaaatgaaactgaatgggttgagcaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaaatgggtacaaaacaaaggataacgagtctcgaaatgaaactgaatgggttgagcaa 240
Query: 304 gatgaacctggtgtatacattactctcacctctctaccaggagatgtaatagatcttaag 363
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgaacccggtgtatacattactctcacctctctaccaggagatgtaatagatcttaag 300
Query: 364 agagttcgcttcagtcgaaagcggtttagtgagaaacaagcagaacaatggtgggctgag 423
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 agagttcgcttcagtcgaaagcggtttagtgagaaacaagcagaaccatggtgggctgag 360
Query: 424 aatcgggcaagagtatatgaactgtacaacgtgcgcttgattgacaagtcaagtattggt 483
|||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 361 aatcgggccagagtatatgaactgtaccacgtgcgcttgattgacaagtccagtattggt 420
Query: 484 gttgggagtgaggaactggctcattga 510
|||||||||||||||||||||||||||
Sbjct: 421 gttgggagtgaggaactggctcattga 447
>gnl|LJGI|TC69697 similar to UniRef100_A7PQZ5 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 798
Score = 351 bits (177), Expect = 3e-96
Identities = 396/469 (84%)
Strand = Plus / Plus
Query: 42 atcaccatctcttgcttcctttggttccgaccttggttccaatgacgttaccaatgctac 101
|||||| ||||| ||||| ||||||||| | | | ||||||||| || | ||||| |
Sbjct: 20 atcaccttctctagcttcttttggttccaatccttcttccaatgaaattggctatgcttc 79
Query: 102 gattgatcaattgactattcaaacaagaagccaagagtcagacttaacaggatcaaatga 161
||||||| ||| | ||||||| ||| ||||| ||| |||||||| | ||||||||| |
Sbjct: 80 cattgatcgattaaatattcaagcaacaagcccagaagcagacttagctggatcaaataa 139
Query: 162 ccagttgctttcaaatggatcaagcactatcaccaaccgtagtgcaggtcacggtaaaca 221
||||| |||||||||||||||||||| ||| || || | |||||||||| ||||||
Sbjct: 140 ccagtcactttcaaatggatcaagcacggtcagtaatcgcaatgcaggtcacactaaaca 199
Query: 222 cagtcaatcaaatgcaactagcagaaatgggtacaaaacaaaggataacgagtctcgaaa 281
|| || ||| || | | || ||||||||| || ||||||||||| || ||||| ||
Sbjct: 200 gagccagtcagattctaataatagaaatgggagcagaacaaaggatagtgaatctcgtaa 259
Query: 282 tgaaactgaatgggttgagcaagatgaacctggtgtatacattactctcacctctctacc 341
||| | ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 260 tgagagtgaatgggttgagcaagatgaacctggtgtatatattaccctcacctccctacc 319
Query: 342 aggagatgtaatagatcttaagagagttcgcttcagtcgaaagcggtttagtgagaaaca 401
||||| ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 320 aggaggtgtaaaagatcttaagagagttcgattcagtcgaaagcggttcagtgagaaaca 379
Query: 402 agcagaacaatggtgggctgagaatcgggcaagagtatatgaactgtacaacgtgcgctt 461
|||||| ||||||||||||||||| ||||||||||||||||||| |||||| || || |
Sbjct: 380 agcagagcaatggtgggctgagaaccgggcaagagtatatgaacagtacaatgtacgaat 439
Query: 462 gattgacaagtcaagtattggtgttgggagtgaggaactggctcattga 510
|||||||||||| ||| |||||||||||||||| || ||||||||||||
Sbjct: 440 gattgacaagtccagtgttggtgttgggagtgatgacctggctcattga 488
>gnl|LJGI|TC80419 similar to UniRef100_A7PQZ5 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 588
Score = 105 bits (53), Expect = 3e-22
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 411 atggtgggctgagaatcgggcaagagtatatgaactgtacaacgtgcgcttgattgacaa 470
||||||||||||||| ||| ||||||||||||||| |||| | || || ||||||||||
Sbjct: 2 atggtgggctgagaaccggncaagagtatatgaaccgtaccatgtacgaatgattgacaa 61
Query: 471 gtcaagtattggtgttgggagtgaggaactggctcattga 510
||| ||| |||||||||||||||| || ||||||||||||
Sbjct: 62 gtccagtgttggtgttgggagtgatgacctggctcattga 101