Miyakogusa Predicted Gene
- Lj0g3v0267359.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0267359.1 Non Chatacterized Hit- tr|A5BC22|A5BC22_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.04,3e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Ribonuclease H-like,Ribonuclease H-like domain; ZF_,gene.g20750.t1.1
(1908 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70059 similar to UniRef100_A7NVZ0 Cluster: Chromosome... 1679 0.0
gnl|LJGI|TC75165 similar to UniRef100_A7NVZ0 Cluster: Chromosome... 787 0.0
>gnl|LJGI|TC70059 similar to UniRef100_A7NVZ0 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (30%)
Length = 1256
Score = 1679 bits (847), Expect = 0.0
Identities = 853/855 (99%)
Strand = Plus / Plus
Query: 1 atgaaggagaacctggaaggatgtcgtcccaacaagaaacaaaagcaagttgatgtgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atgaaggagaacctggaaggatgtcgtcccaacaagaaacaaaagcaagttgatgtgcaa 455
Query: 61 tcatatatgaattttggctctaatgatgatgaagacgacgatgagcaagttgggtgtcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tcatatatgaattttggctctaatgatgatgaagacgacgatgagcaagttgggtgtcga 515
Query: 121 agcaaagggaagcaattgatggatgatagaaatgtagctgtaaatttaactcctcttagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 agcaaagggaagcaattgatggatgatagaaatgtagctgtaaatttaactcctcttagg 575
Query: 181 tccctaggatatattgacccagggtgggaacatggtgttgctcaggatgagagaaagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tccctaggatatattgacccagggtgggaacatggtgttgctcaggatgagagaaagaag 635
Query: 241 aaagtaaaatgcaattactgtgagaaagttgttagtggaggtattaatcgatttaaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aaagtaaaatgcaattactgtgagaaagttgttagtggaggtattaatcgatttaaacaa 695
Query: 301 catttggctagaattcctggagaggtagcaccttgtaaaaaggctccagaagaagtttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 catttggctagaattcctggagaggtagcaccttgtaaaaaggctccagaagaagtttat 755
Query: 361 cttaaaataaaagagaatatgaaatggcatcgcactggaaggagacacaggagacctgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 cttaaaataaaagagaatatgaaatggcatcgcactggaaggagacacaggagacctgag 815
Query: 421 gctaaggagttgatgccttcctatgcaaagtctgatgatgaagatgatgagtatgagcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 gctaaggagttgatgccttcctatgcaaagtctgatgatgaagatgatgagtatgagcaa 875
Query: 481 gaggaagatgctttgcatcatatgaacaaggaaactttcattgatgttgacaagagattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 gaggaagatgctttgcatcatatgaacaaggaaactttcattgatgttgacaagagattc 935
Query: 541 tctaaagatttaatgaagaccttcaaaggtatttcccctagtacttgtcctgaaccagta 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 936 tctaaagatttaatgaagaccttcaaaggtatttcacctagtacttgtcctgaaccagta 995
Query: 601 ttgagaagatcaagattagataatgtttgcctgaaactgcccaagaatcagactcctcaa 660
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 996 ttgagaagatcaagattagataatgtttacctgaaactgcccaagaatcagactcctcaa 1055
Query: 661 acatacaaacctggaaaagttaagacgggccccaccaagaaatcacgcagggaagttttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 acatacaaacctggaaaagttaagacgggccccaccaagaaatcacgcagggaagttttt 1115
Query: 721 tctacaatatgcaagttcttttaccatgcgggaattcccgtacaggctgctgactcccta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 tctacaatatgcaagttcttttaccatgcgggaattcccgtacaggctgctgactcccta 1175
Query: 781 tattttcataaaatgctggaagcagttggtcaatatggacaaggactggtatgccctcca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1176 tattttcataaaatgctggaagcagttggtcaatatggacaaggactggtatgccctcca 1235
Query: 841 agccaacttatttct 855
|||||||||||||||
Sbjct: 1236 agccaacttatttct 1250
>gnl|LJGI|TC75165 similar to UniRef100_A7NVZ0 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 640
Score = 787 bits (397), Expect = 0.0
Identities = 404/405 (99%), Gaps = 1/405 (0%)
Strand = Plus / Plus
Query: 1505 aaaatcgactatctcagaagaaactgaatgacattgtcttcgttcactacaatttgagac 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaatcgactatctcagaagaaactgaatgacattgtcttcgttcactacaatttgagac 60
Query: 1565 ttagagaatgccaagtaagaaaaaggtccagggactcaaagtcaacctc-tgttgacagt 1623
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 ttagagaatgccaagtaagaaaaaggtccagggactcaaagtcaacctcctgttgacagt 120
Query: 1624 gttctactagagcatttactcagtgattggatagtcgatgccaatgttcaaagctttgat 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttctactagagcatttactcagtgattggatagtcgatgccaatgttcaaagctttgat 180
Query: 1684 ggtgataagaattacccttttggagttgaactagatgatgaatatgaaaccgattcaatt 1743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtgataagaattacccttttggagttgaactagatgatgaatatgaaaccgattcaatt 240
Query: 1744 gattatgatgatggagctgcaaggcctctaaagggatcatcccttgaactggagactatg 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gattatgatgatggagctgcaaggcctctaaagggatcatcccttgaactggagactatg 300
Query: 1804 gatggtgtagcagtaggatcaccagatgtagaacatgctaacattgatgatgccagtgac 1863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatggtgtagcagtaggatcaccagatgtagaacatgctaacattgatgatgccagtgac 360
Query: 1864 gatgagtctgatctgaattattttcatgatgatttgagcgagtaa 1908
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatgagtctgatctgaattattttcatgatgatttgagcgagtaa 405