Miyakogusa Predicted Gene

Lj0g3v0267029.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0267029.1 Non Chatacterized Hit- tr|K4D0W2|K4D0W2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,43.12,0.0000000001,seg,NULL,
NODE_107017_length_312_cov_7.948718.path2.1
         (331 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV409746 weakly similar to UniRef100_A7Q816 Cluster: Ch...   359   7e-99

>gnl|LJGI|AV409746 weakly similar to UniRef100_A7Q816 Cluster: Chromosome undetermined
           scaffold_62, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_62, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (17%)
          Length = 398

 Score =  359 bits (181), Expect = 7e-99
 Identities = 181/181 (100%)
 Strand = Plus / Plus

                                                                       
Query: 151 aattgcattccaatttccgcaatcgccgacgcggccgcgaactccggtgaggacgaagaa 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aattgcattccaatttccgcaatcgccgacgcggccgcgaactccggtgaggacgaagaa 189

                                                                       
Query: 211 gcccccctcccaccggaattcctcgccgccacgtcagctcaaaagctcccactcggcccc 270
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gcccccctcccaccggaattcctcgccgccacgtcagctcaaaagctcccactcggcccc 249

                                                                       
Query: 271 aaccggaacttcgactccgacaccgtccacgcccccgccggtgccgcctgcaccctcttc 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aaccggaacttcgactccgacaccgtccacgcccccgccggtgccgcctgcaccctcttc 309

            
Query: 331 c 331
           |
Sbjct: 310 c 310



 Score =  109 bits (55), Expect = 1e-23
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                 
Query: 22 ataaacatgggttcccatagtagcaacaaccataattcaaaacctctaactacca 76
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ataaacatgggttcccatagtagcaacaaccataattcaaaacctctaactacca 55