Miyakogusa Predicted Gene
- Lj0g3v0266889.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0266889.1 Non Chatacterized Hit- tr|D8T1H0|D8T1H0_SELML
Putative uncharacterized protein EMBL1692-2
OS=Selagin,30.89,0.00000000000007,PORR,Plant organelle RNA recognition
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NU,CUFF.17608.1
(1560 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59750 similar to UniRef100_A7PZU2 Cluster: Chromosome... 680 0.0
gnl|LJGI|BP057817 weakly similar to UniRef100_Q01FJ1 Cluster: Pe... 204 1e-51
gnl|LJGI|GO028909 weakly similar to UniRef100_Q758S9 Cluster: AE... 94 3e-18
>gnl|LJGI|TC59750 similar to UniRef100_A7PZU2 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1277
Score = 680 bits (343), Expect = 0.0
Identities = 718/843 (85%)
Strand = Plus / Plus
Query: 214 agagcagcagtgaagaggaggaaggagatgccctttgataacgtgattcaaagggacaag 273
|||||||| || ||||| ||||| ||| | ||||||||||| || || || ||| |||||
Sbjct: 427 agagcagctgttaagagaaggaaagagcttccctttgataatgtcatacagaggaacaag 486
Query: 274 aagctcaagtttgtgctcagggtgaggaagattctggtgagtcagccggatcgcgttatg 333
|||||||| ||||| |||| ||| |||||||||||| |||| || ||| |||| | |||
Sbjct: 487 aagctcaaatttgttctcaaggtcaggaagattctgatgaggcaaccgtatcggttcatg 546
Query: 334 tcgctgaaggagttggggaagtataaaagggaactgggtttggatagaaagaggagactt 393
||| | ||||| |||| | ||||||||| ||| ||||||||||||| ||||||||| |
Sbjct: 547 tcggttaaggacctgggtaggtataaaagagaattgggtttggataggaagaggagattg 606
Query: 394 attgctctgttgaggaaattccctgcagtgtttgagattatggaagaaggggttttttcc 453
|||||||||||| |||||||||||| |||||| ||||| |||||||||||||| ||
Sbjct: 607 gttgctctgttgaagaaattccctgctgtgtttcagattgtggaagaaggggttcactct 666
Query: 454 ctcaagttcaagatgacgccggaggctgataggctttatcttgaggagttgagggttagg 513
|||| |||||||||||| || || || || ||||||||| ||||||| |||||||| |||
Sbjct: 667 ctcaggttcaagatgacccctgatgccgaaaggctttattttgaggaattgagggtcagg 726
Query: 514 aatgaaatggaggatttggtggttgtcaagcttaggaaattgttgatgatgtctttggag 573
||||||||||| ||||| | ||| |||||||||||||||||||||||||||| |||||
Sbjct: 727 aatgaaatggaagatttcttagttctcaagcttaggaaattgttgatgatgtccatggag 786
Query: 574 aagaggattttgttggagaaaattgcccatcttggggctgatttggggctcccgcaggat 633
|| |||| |||||||||||||| || ||||| | |||||||||||||||| | |||
Sbjct: 787 aaacggatattgttggagaaaatagcacatctcatgactgatttggggctccctctggac 846
Query: 634 tttcgcgaaaccatttgtcatagttaccctcagtattttaaagttgttgcaactgaaaga 693
||||| || |||||||||| || |||||||| || || |||||||| ||||||||| ||
Sbjct: 847 tttcgtgacaccatttgtcgcaggtaccctcaatacttcaaagttgtagcaactgaagga 906
Query: 694 ggccctgctctggaattaacacactgggatcctgagcttgcggtttctgcggccgagcta 753
|| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 907 gggcctgccttggaattaacacactgggatcctgagcttgcagtttctgcggccgagcta 966
Query: 754 tccgcagaagagaatcggattagggagctggaagaacagaatttaatcatagacaggact 813
||||| ||||| || ||| || || || ||||||| |||||||||||||||||| ||
Sbjct: 967 tccgcggaagaaaagcgggccagagaactagaagaactaaatttaatcatagacaggcct 1026
Query: 814 cccaaattcaatagagtaaagcttcctaagggtcttaatctttctaagggtgagatgagg 873
||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||| |||
Sbjct: 1027 cccaagttcaatagagtgaagcttcctaagggtcttaatctttccaagggagagacaagg 1086
Query: 874 aggataatgcaattcagggacttgccttatatatctccatatgcggatttctcaatgctg 933
| | |||||||||||||||||||| || |||||| || || |||||||||||||||||
Sbjct: 1087 aagctaatgcaattcagggacttggattttatatcgccttactcggatttctcaatgctg 1146
Query: 934 acttcgggaacacgggagaaagagaagcatgcttgtggtgttgttcatgagattctgagt 993
| | || |||||||||||||||||||| ||||||| ||||||||||||||| ||||
Sbjct: 1147 aggtttgggtcacgggagaaagagaagcattcttgtggagttgttcatgagattttgagc 1206
Query: 994 ctcactcttgagaagagaactctggttgatcactttactcattttcgagaggagttcaga 1053
||||||||||||||||||||||| ||||||||||| |||||||| || ||||||||||||
Sbjct: 1207 ctcactcttgagaagagaactcttgttgatcacttgactcatttccgggaggagttcaga 1266
Query: 1054 ttc 1056
|||
Sbjct: 1267 ttc 1269
Score = 56.0 bits (28), Expect = 7e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 30 ttcttcatcatcatgtacccctttgccatttttcatctcaaata 73
||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 237 ttcttcatcatattctacccctttaccatttttcatctcaaata 280
>gnl|LJGI|BP057817 weakly similar to UniRef100_Q01FJ1 Cluster: Pescadillo-like protein;
n=1; Ostreococcus tauri|Rep: Pescadillo-like protein -
Ostreococcus tauri, partial (3%)
Length = 545
Score = 204 bits (103), Expect = 1e-51
Identities = 115/119 (96%)
Strand = Plus / Minus
Query: 1442 ctggaacattggagatcagtcaaagaaagacaattaatcaagttgaagactcagaaccga 1501
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 486 ctggaacattggagatccgtcaaagaaagaccattaatcaagttgaagactcagaaccga 427
Query: 1502 ataatgaaaaggtccttgttcctacactcccggatggccgtcccagagaacagtggtaa 1560
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 426 ataatgaaaaggtccttgttcctacactcccggatggccgtccccgagaaccgtggtaa 368
>gnl|LJGI|GO028909 weakly similar to UniRef100_Q758S9 Cluster: AEL327Wp; n=1;
Eremothecium gossypii|Rep: AEL327Wp - Ashbya gossypii
(Yeast) (Eremothecium gossypii), partial (3%)
Length = 870
Score = 93.7 bits (47), Expect = 3e-18
Identities = 100/117 (85%), Gaps = 3/117 (2%)
Strand = Plus / Minus
Query: 1220 atgttccacgatttcccaagggacctgctcgaagaagagttggagatggcttggaagagg 1279
|||||||| | ||||||||||| ||||||| ||||| |||||||||||| |||||| |
Sbjct: 870 atgttccaaggtttcccaagggtgctgctcgcagaagggttggagatggcatggaaggga 811
Query: 1280 gtgatagcagagaagatgatagtggtgaagagg---aagactggtcagatgttgata 1333
|||||| |||||||||| ||||||||||||| |||| ||||||||||||||||
Sbjct: 810 atgatagtagagaagatgcaagtggtgaagaggaacaagaatggtcagatgttgata 754
Score = 67.9 bits (34), Expect = 2e-10
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 1462 caaagaaagacaattaatcaagttgaagactcagaaccgaataatgaaaaggtccttgtt 1521
||||||||||||||||| |||||||||| |||| | |||||| ||||||||||||| |
Sbjct: 610 caaagaaagacaattaaacaagttgaaggctcaagaaagaataaggaaaaggtccttgct 551
Query: 1522 cctaca 1527
||||||
Sbjct: 550 cctaca 545