Miyakogusa Predicted Gene

Lj0g3v0266629.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0266629.1 Non Chatacterized Hit- tr|F6HUP3|F6HUP3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,46.74,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,Glycoside hydrolase, catalytic domai,CUFF.17580.1
         (271 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO025078 similar to UniRef100_Q2HTU0 Cluster: Glycoside...   283   3e-76

>gnl|LJGI|GO025078 similar to UniRef100_Q2HTU0 Cluster: Glycoside hydrolase, family 5;
           Ricin B-related lectin; n=1; Medicago truncatula|Rep:
           Glycoside hydrolase, family 5; Ricin B-related lectin -
           Medicago truncatula (Barrel medic), partial (14%)
          Length = 720

 Score =  283 bits (143), Expect = 3e-76
 Identities = 239/271 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtggacgcgctatggcgatcacattgtgaatgataccttaaacacttttgatgtgcct 60
           |||||||| |||||||||| ||||||||||| ||  |||||  |   ||| |||||||| 
Sbjct: 298 atgtggacacgctatggcggtcacattgtgagtggcaccttcgatggtttggatgtgccg 357

                                                                       
Query: 61  gaggtggtgactggcatagccaagaacaacccttctgtgttgaaaatgactcacattcag 120
           ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 358 gaggtggtggctggcatagccaagaacaatccttctgtgttgaaaatgacacacattcag 417

                                                                       
Query: 121 gcctttgaagctgtggttcttgagcttggggctcaaaatgtgaaggttttgcttgataac 180
           | ||||||||||||||||| ||| ||||| || ||||||||||| | |||||||||||||
Sbjct: 418 gtctttgaagctgtggttcatgaacttggtgcacaaaatgtgaaagctttgcttgataac 477

                                                                       
Query: 181 catgtcagtgagcctaagtggtgctgtggtgatgatgatgaaaatgggttctttcatgac 240
           ||||| |||||||| || |||||||||  |||||||||||| ||||| ||||||||||||
Sbjct: 478 catgttagtgagccaaaatggtgctgtaatgatgatgatgagaatggattctttcatgac 537

                                          
Query: 241 agacattttgatcctgaggaatgggtgcagg 271
           ||||| ||||||||| |||| ||||||||||
Sbjct: 538 agacactttgatcctcaggagtgggtgcagg 568