Miyakogusa Predicted Gene
- Lj0g3v0266349.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0266349.4 Non Chatacterized Hit- tr|F6HWY1|F6HWY1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,59.52,2e-19,alpha/beta knot,NULL; SUBFAMILY NOT NAMED,NULL; RNA
METHYLTRANSFERASE,NULL; SpoU_methylase,tRNA/rRNA,CUFF.17563.4
(324 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74163 similar to UniRef100_A7R0V1 Cluster: Chromosome... 480 e-135
gnl|LJGI|TC64727 similar to UniRef100_A7R0V1 Cluster: Chromosome... 323 4e-88
>gnl|LJGI|TC74163 similar to UniRef100_A7R0V1 Cluster: Chromosome undetermined
scaffold_324, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_324,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (35%)
Length = 578
Score = 480 bits (242), Expect = e-135
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 1 atggactatttgattattcctgataaagctgaaattcccaatgggttggttacgtctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atggactatttgattattcctgataaagctgaaattcccaatgggttggttacgtctact 396
Query: 61 gcttctattgtacatgtgagttccatagtgatgagaaagctttcaggactacaatcgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gcttctattgtacatgtgagttccatagtgatgagaaagctttcaggactacaatcgact 456
Query: 121 gactctgttgatgcaattgccctaattaaaattcctgacagtgttttcaatttagatggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gactctgttgatgcaattgccctaattaaaattcctgacagtgttttcaatttagatggc 516
Query: 181 gatcaaaacaactgctacaagtggtttccatctgcacatcggatcttagtgcttgatggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gatcaaaacaactgctacaagtggtttccatctgcacatcggatcttagtgcttgatggg 576
Query: 241 at 242
||
Sbjct: 577 at 578
>gnl|LJGI|TC64727 similar to UniRef100_A7R0V1 Cluster: Chromosome undetermined
scaffold_324, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_324,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (31%)
Length = 673
Score = 323 bits (163), Expect = 4e-88
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 162 tgttttcaatttagatggcgatcaaaacaactgctacaagtggtttccatctgcacatcg 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tgttttcaatttagatggcgatcaaaacaactgctacaagtggtttccatctgcacatcg 471
Query: 222 gatcttagtgcttgatgggattcaggatcctggtaaccttggtacattgctcagatcagc 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gatcttagtgcttgatgggattcaggatcctggtaaccttggtacattgctcagatcagc 531
Query: 282 tgtggcctttagatgggtaagatattatccttctcctctgtaa 324
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgtggcctttagatgggtaagatattatccttctcctctgtaa 574
Score = 149 bits (75), Expect = 1e-35
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 atggactatttgattattcctgataaagctgaaattcccaatgggttggttacgtctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atggactatttgattattcctgataaagctgaaattcccaatgggttggttacgtctact 396
Query: 61 gcttctattgtacat 75
|||||||||||||||
Sbjct: 397 gcttctattgtacat 411