Miyakogusa Predicted Gene

Lj0g3v0266109.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0266109.1 Non Chatacterized Hit- tr|I1KFA1|I1KFA1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.32,0.00000005,
,CUFF.17544.1
         (116 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58286 similar to UniRef100_Q9M0H8 Cluster: Predicted ...   125   6e-29
gnl|LJGI|TC77371 similar to UniRef100_Q9M0H8 Cluster: Predicted ...    50   3e-06

>gnl|LJGI|TC58286 similar to UniRef100_Q9M0H8 Cluster: Predicted proline-rich
           protein; n=1; Arabidopsis thaliana|Rep: Predicted
           proline-rich protein - Arabidopsis thaliana (Mouse-ear
           cress), partial (40%)
          Length = 1035

 Score =  125 bits (63), Expect = 6e-29
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgtttcctgcgacttcatatagtccacctgaatattctttaagtcaagatgtgattgcaa 61
           |||||||||| ||||| |||| |||||||||| |||||||||| ||||||||||||||||
Sbjct: 301 tgtttcctgctacttcctataatccacctgaagattctttaagccaagatgtgattgcaa 360

                                                                  
Query: 62  ctatagagaagagtatgaaaaattctgcagacaacctcatgcagtgtctagaggg 116
           || ||||||||||||||||||| | | | ||||||||||||| || ||| |||||
Sbjct: 361 ctgtagagaagagtatgaaaaaatatacggacaacctcatgcggtttctggaggg 415


>gnl|LJGI|TC77371 similar to UniRef100_Q9M0H8 Cluster: Predicted proline-rich
           protein; n=1; Arabidopsis thaliana|Rep: Predicted
           proline-rich protein - Arabidopsis thaliana (Mouse-ear
           cress), partial (35%)
          Length = 1361

 Score = 50.1 bits (25), Expect = 3e-06
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 26  cacctgaatattctttaagtcaagatgtgattgcaactatagagaagagtatgaaaa 82
           ||||||||  ||||||| | |||||||||||||||||  | ||||||||||| ||||
Sbjct: 516 cacctgaaggttctttaggccaagatgtgattgcaacagttgagaagagtataaaaa 572