Miyakogusa Predicted Gene
- Lj0g3v0265709.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0265709.1 tr|G7ILL5|G7ILL5_MEDTR 26S proteasome non-ATPase
regulatory subunit OS=Medicago truncatula GN=MTR_2g,96.44,0,JAB1/MPN
domain,NULL; no description,NULL; 26S PROTEASOME NON-ATPASE REGULATORY
SUBUNIT 14,NULL; EUK,NODE_14050_length_1370_cov_294.707306.path2.1
(933 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66000 homologue to UniRef100_Q9LT08 Cluster: 26S prot... 1770 0.0
gnl|LJGI|TC65286 618 e-176
gnl|LJGI|BW624741 homologue to UniRef100_Q9LT08 Cluster: 26S pro... 274 9e-73
gnl|LJGI|AV771802 137 1e-31
gnl|LJGI|BP040744 homologue to UniRef100_Q1M303 Cluster: 26S pro... 127 1e-28
>gnl|LJGI|TC66000 homologue to UniRef100_Q9LT08 Cluster: 26S proteasome non-ATPase
regulatory subunit 14; n=3; Arabidopsis thaliana|Rep: 26S
proteasome non-ATPase regulatory subunit 14 - Arabidopsis
thaliana (Mouse-ear cress), partial (97%)
Length = 1421
Score = 1770 bits (893), Expect = 0.0
Identities = 923/933 (98%)
Strand = Plus / Plus
Query: 1 atggagaggcttcaacgaatgttcgccggtgcaggtggcgcactagggcatccaccccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atggagaggcttcaacgaatgttcgccggtgcaggtggcgcactagggcatccaccccca 199
Query: 61 gattccccaactctcgattcctccgagcaggtctacatctcttcgctcgcacttctcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gattccccaactctcgattcctccgagcaggtctacatctcttcgctcgcacttctcaag 259
Query: 121 atgctcaagcacggaagagctggggttcctatggaggtgatgggtctgatgttgggggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgctcaagcacggaagagctggggttcctatggaggtgatgggtctgatgttgggggag 319
Query: 181 ttcgtggatgagtacactgttcgtgttgttgatgtctttgcaatgccgcagagtggaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttcgtggatgagtacactgttcgtgttgttgatgtctttgcaatgccgcagagtggaact 379
Query: 241 ggtgttagtgttgaagctgttgatcatgttttccagactaatatgcttgacatgcttaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggtgttagtgttgaagctgttgatcatgttttccagactaatatgcttgacatgcttaag 439
Query: 301 caaactggaagacctgagatggtggttggctggtaccattcacatcctggatttggatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caaactggaagacctgagatggtggttggctggtaccattcacatcctggatttggatgt 499
Query: 361 tggctgtctggtgttgacatcaatacacagcagagttttgaggctttgaatcagcgagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tggctgtctggtgttgacatcaatacacagcagagttttgaggctttgaatcagcgagca 559
Query: 421 gtggctggagttgtagatccaatacagagggttaaaggaaaaggggtgattgatgctttt 480
||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 560 gtggctgtagttgtagatccaatacagagtgttaaaggaaaagtggtgattgatgctttt 619
Query: 481 cgattgatcaaaccccagacaatgatgcttggtcaagaaccaaggcagacaacatccaat 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cgattgatcaatccccagacaatgatgcttggtcaagaaccaaggcagacaacatccaat 679
Query: 541 ttggggcatcttaacaaaccatccatccaagcattgatccatggattgaacaggcattat 600
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 680 ttggggcatcttaacaaaccatccattcaagcattgatccatggattgaacaggcattat 739
Query: 601 tattccatagctattaattacagaaagaatgaacttgaggagaagatcctgcttaagctc 660
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 740 tattccatagctattaattacagaaagaatgaacttgaggagaagatgctgcttaatctc 799
Query: 661 cacaagaagaaatccactgacggcctgacacttcatagttttgacacacattccaaaact 720
||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 800 cacaagaagaaatggactgacggcctgacacttcatcgttttgacacacattccaaaact 859
Query: 721 aatgaacagactgttcaggaaatgctgagtttagctgtcaaatacaacaaggctgtccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 aatgaacagactgttcaggaaatgctgagtttagctgtcaaatacaacaaggctgtccaa 919
Query: 781 gaggaagatgagctttcccctgagaagcttgcaatagcaaatgtgggaagacaagatgcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 gaggaagatgagctttcccctgagaagcttgcaatagcaaatgtgggaagacaagatgcc 979
Query: 841 aagaagcaccttgaagagcatgtctcaaacttgatgtcttccaacatcgttcaaactctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 aagaagcaccttgaagagcatgtctcaaacttgatgtcttccaacatcgttcaaactctt 1039
Query: 901 ggaatgatgcttgatactgttgtcttctagagt 933
|||||||||||||||||||||||||||||||||
Sbjct: 1040 ggaatgatgcttgatactgttgtcttctagagt 1072
>gnl|LJGI|TC65286
Length = 1375
Score = 618 bits (312), Expect = e-176
Identities = 777/932 (83%)
Strand = Plus / Plus
Query: 1 atggagaggcttcaacgaatgttcgccggtgcaggtggcgcactagggcatccaccccca 60
||||||||||||||| |||||||||| ||| |||| || ||||| || || || || ||
Sbjct: 165 atggagaggcttcaaagaatgttcgcgggtacaggaggagcactgggtcaccctccacct 224
Query: 61 gattccccaactctcgattcctccgagcaggtctacatctcttcgctcgcacttctcaag 120
|||||||| || ||||||||||| |||||||| |||||||| || ||||| ||||||||
Sbjct: 225 gattcccccaccctcgattcctcagagcaggtttacatctcctcactcgctcttctcaaa 284
Query: 121 atgctcaagcacggaagagctggggttcctatggaggtgatgggtctgatgttgggggag 180
|||||||| || || || ||||| || || ||||| ||||||||| ||||||||||||||
Sbjct: 285 atgctcaaacatggtagggctggtgtgccgatggaagtgatgggtttgatgttgggggag 344
Query: 181 ttcgtggatgagtacactgttcgtgttgttgatgtctttgcaatgccgcagagtggaact 240
|| ||||||||||||||||| || ||||||||||| ||||| ||||| |||||||| |||
Sbjct: 345 tttgtggatgagtacactgtgcgcgttgttgatgtgtttgctatgcctcagagtggtact 404
Query: 241 ggtgttagtgttgaagctgttgatcatgttttccagactaatatgcttgacatgcttaag 300
|||||||| |||||||||||||||||||| || |||||||| |||||||||||| | ||
Sbjct: 405 ggtgttagcgttgaagctgttgatcatgtatttcagactaacatgcttgacatgttgaaa 464
Query: 301 caaactggaagacctgagatggtggttggctggtaccattcacatcctggatttggatgt 360
|| ||||| ||||| |||||||| || || ||||| |||||||||||||||||||| |||
Sbjct: 465 cagactgggagaccagagatggttgtaggttggtatcattcacatcctggatttggctgt 524
Query: 361 tggctgtctggtgttgacatcaatacacagcagagttttgaggctttgaatcagcgagca 420
||||| ||||| || || || |||||||| ||||||||||||||||| ||||| || |||
Sbjct: 525 tggctttctggagtggatattaatacacaacagagttttgaggctttaaatcaacgggca 584
Query: 421 gtggctggagttgtagatccaatacagagggttaaaggaaaaggggtgattgatgctttt 480
||||||| || || ||||| || ||||| |||||||| || | |||||||||||||||
Sbjct: 585 gtggctgtggtggtggatcctattcagagtgttaaaggcaaggtggtgattgatgctttc 644
Query: 481 cgattgatcaaaccccagacaatgatgcttggtcaagaaccaaggcagacaacatccaat 540
|| |||| || || || || |||||||| ||||| ||||| | |||||||| || |||
Sbjct: 645 cggctgattaatccacaaactatgatgctcggtcaggaaccgcgacagacaacctctaat 704
Query: 541 ttggggcatcttaacaaaccatccatccaagcattgatccatggattgaacaggcattat 600
| || ||||| || || ||||| || ||||| |||||||||| |||||| | ||||||
Sbjct: 705 cttggtcatctgaataagccatctattcaagctctgatccatggcttgaaccgacattat 764
Query: 601 tattccatagctattaattacagaaagaatgaacttgaggagaagatcctgcttaagctc 660
|| |||||||| ||||||||||| || ||||| |||| |||||||| | ||||| ||
Sbjct: 765 tactccatagcaattaattacaggaaaaatgagtttgaagagaagatgttacttaacctt 824
Query: 661 cacaagaagaaatccactgacggcctgacacttcatagttttgacacacattccaaaact 720
|| |||||||||| ||||| || | ||||| | ||||||| ||||||| ||||||
Sbjct: 825 cataagaagaaatggactgatgggttaacactcaagcgttttgattcacattctaaaact 884
Query: 721 aatgaacagactgttcaggaaatgctgagtttagctgtcaaatacaacaaggctgtccaa 780
|||||||||||||||||||| ||| | |||||||| || ||||||||||| || ||
Sbjct: 885 aatgaacagactgttcaggagatgttaagtttagcaacaaagtacaacaaggcagtgcag 944
Query: 781 gaggaagatgagctttcccctgagaagcttgcaatagcaaatgtgggaagacaagatgcc 840
|||||||||||||| | || ||||| |||||||| || ||||||||||| || |||||
Sbjct: 945 gaggaagatgagctgccaccagagaaacttgcaattgctaatgtgggaaggcaggatgct 1004
Query: 841 aagaagcaccttgaagagcatgtctcaaacttgatgtcttccaacatcgttcaaactctt 900
||||||||||||||||||||||| || || ||||||||||| ||||| ||||| ||| |
Sbjct: 1005 aagaagcaccttgaagagcatgtttccaatttgatgtcttcaaacattgttcagactttg 1064
Query: 901 ggaatgatgcttgatactgttgtcttctagag 932
||||||||||| || |||||||| ||||||||
Sbjct: 1065 ggaatgatgctcgacactgttgtgttctagag 1096
>gnl|LJGI|BW624741 homologue to UniRef100_Q9LT08 Cluster: 26S proteasome non-ATPase
regulatory subunit 14; n=3; Arabidopsis thaliana|Rep:
26S proteasome non-ATPase regulatory subunit 14 -
Arabidopsis thaliana (Mouse-ear cress), partial (31%)
Length = 509
Score = 274 bits (138), Expect = 9e-73
Identities = 255/294 (86%)
Strand = Plus / Plus
Query: 1 atggagaggcttcaacgaatgttcgccggtgcaggtggcgcactagggcatccaccccca 60
||||||||||||||| |||||||||| ||| |||| || ||||| || || || || ||
Sbjct: 193 atggagaggcttcaaagaatgttcgcgggtacaggaggagcactgggtcaccctccacct 252
Query: 61 gattccccaactctcgattcctccgagcaggtctacatctcttcgctcgcacttctcaag 120
|||||||| || ||||||||||| |||||||| |||||||| || ||||| ||||||||
Sbjct: 253 gattcccccaccctcgattcctcagagcaggtttacatctcctcactcgctcttctcaaa 312
Query: 121 atgctcaagcacggaagagctggggttcctatggaggtgatgggtctgatgttgggggag 180
|||||||| || || || ||||| || || ||||| ||||||||| ||||||||||||||
Sbjct: 313 atgctcaaacatggtagggctggtgtgccgatggaagtgatgggtttgatgttgggggag 372
Query: 181 ttcgtggatgagtacactgttcgtgttgttgatgtctttgcaatgccgcagagtggaact 240
|| ||||||||||||||||| || ||||||||||| ||||| ||||| |||||||| |||
Sbjct: 373 tttgtggatgagtacactgtgcgcgttgttgatgtgtttgctatgcctcagagtggtact 432
Query: 241 ggtgttagtgttgaagctgttgatcatgttttccagactaatatgcttgacatg 294
|||||||| |||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 433 ggtgttagcgttgaagctgttgatcatgtatttcagactaacatgcttgacatg 486
>gnl|LJGI|AV771802
Length = 321
Score = 137 bits (69), Expect = 1e-31
Identities = 88/93 (94%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 842 agaagcaccttg-aagagcatgtctcaaacttgatgtcttccaacatcgttcaaactctt 900
|||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 308 agaagcaccttgcaagagcatgtctccgacttgatgtcttccaacatcgttcctactctt 249
Query: 901 ggaatgatgcttgatactgttgtcttctagagt 933
|||||||||||||||||||||||||||||||||
Sbjct: 248 ggaatgatgcttgatactgttgtcttctagagt 216
>gnl|LJGI|BP040744 homologue to UniRef100_Q1M303 Cluster: 26S proteasome subunit 11;
n=1; Platanus x acerifolia|Rep: 26S proteasome subunit
11 - Platanus acerifolia (London plane tree), partial
(20%)
Length = 427
Score = 127 bits (64), Expect = 1e-28
Identities = 115/132 (87%)
Strand = Plus / Minus
Query: 802 gagaagcttgcaatagcaaatgtgggaagacaagatgccaagaagcaccttgaagagcat 861
||||| |||||||| || ||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 411 gagaaacttgcaattgctaatgtgggaaggcaggatgcgaagaagcaccttgaagagcat 352
Query: 862 gtctcaaacttgatgtcttccaacatcgttcaaactcttggaatgatgcttgatactgtt 921
|| || || ||||||||||| ||||| ||||| ||| | ||||||||||| || ||||||
Sbjct: 351 gtttccaatttgatgtcttcaaacattgttcagactttgggaatgatgctcgacactgtt 292
Query: 922 gtcttctagagt 933
|| |||||||||
Sbjct: 291 gtgttctagagt 280