Miyakogusa Predicted Gene

Lj0g3v0265629.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0265629.1 Non Chatacterized Hit- tr|I1J816|I1J816_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44224
PE,71.86,0,Exostosin,Exostosin-like; seg,NULL; EXOSTOSIN FAMILY
PROTEIN,NULL; EXOSTOSIN (HEPARAN SULFATE GLYCOS,CUFF.17513.1
         (1851 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65655 similar to UniRef100_A7P576 Cluster: Chromosome...    68   2e-10
gnl|LJGI|FS351364 similar to UniRef100_A7P576 Cluster: Chromosom...    56   8e-07

>gnl|LJGI|TC65655 similar to UniRef100_A7P576 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (33%)
          Length = 864

 Score = 67.9 bits (34), Expect = 2e-10
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1489 tacatgaatagcagcaggtattgcatatgtgctagaggctatgaggttcacagcccaaga 1548
            |||||||| ||||||| ||||||||| ||||| |  || ||||| ||| |||| ||||||
Sbjct: 322  tacatgaagagcagcaagtattgcatttgtgcaaaggggtatgaagttaacagtccaaga 381

                                                                        
Query: 1549 atagttgaggccattttttctgagtgtgtgccagtcatcatatcagataactatgtgcct 1608
             | ||||||||||| || | ||| ||||| || || ||||||||||| || | |||||||
Sbjct: 382  gttgttgaggccatcttctatgaatgtgttcctgttatcatatcagacaattttgtgcct 441

              
Query: 1609 cc 1610
            ||
Sbjct: 442  cc 443


>gnl|LJGI|FS351364 similar to UniRef100_A7P576 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (30%)
          Length = 718

 Score = 56.0 bits (28), Expect = 8e-07
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 1408 cactgggagaataaagaacctgacatgaaaat 1439
            ||||||||||| ||||||||||||||||||||
Sbjct: 495  cactgggagaacaaagaacctgacatgaaaat 464