Miyakogusa Predicted Gene
- Lj0g3v0265619.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0265619.2 Non Chatacterized Hit- tr|A2XVM7|A2XVM7_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,23.31,0.00000000002,CRM,RNA-binding, CRM domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; YhbY-like,RNA-binding,,CUFF.17523.2
(2076 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC599773 similar to UniRef100_A7PEJ5 Cluster: Chromosom... 1128 0.0
gnl|LJGI|BP082894 281 9e-75
>gnl|LJGI|DC599773 similar to UniRef100_A7PEJ5 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 575
Score = 1128 bits (569), Expect = 0.0
Identities = 571/572 (99%)
Strand = Plus / Plus
Query: 1 atgggtgcgactgtgaaggtaccattcccattccccatcaccgacccgaacccgacccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atgggtgcgactgtgaaggtaccattcccattccccatcaccgacccgaacccgacccgc 63
Query: 61 cagagaccctccacggaggtccatttctcccgctggaacaacgccctcgccgtcaaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 cagagaccctccacggaggtccatttctcccgctggaacaacgccctcgccgtcaaactc 123
Query: 121 caagagcgccgccgacccatccaggaaatcgaggtcgaaatccgccgcactcgccgcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 caagagcgccgccgacccatccaggaaatcgaggtcgaaatccgccgcactcgccgcttc 183
Query: 181 gactccgccgaaaacatagccaacaccgccacagaatcatcctcctcaacctccaccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gactccgccgaaaacatagccaacaccgccacagaatcatcctcctcaacctccaccacc 243
Query: 241 accacctccacctccgcatcattcaagtccgtcggaacaccctccacaccctcgcgccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 accacctccacctccgcatcattcaagtccgtcggaacaccctccacaccctcgcgccca 303
Query: 301 tccatcccggggaaaaaatcaaaatactccaaatccccgccgaaacccaaaccgcctagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tccatcccggggaaaaaatcaaaatactccaaatccccgccgaaacccaaaccgcctagg 363
Query: 361 gtttcgagcttccgctttaaccgcttcctaccaggaccttccgacgtgagaatcggcgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtttcgagcttccgctttaaccgcttcctaccaggaccttccgacgtgagaatcggcgaa 423
Query: 421 gatggagtctcctacgtcgtcgacggtgctccgtttgagttcaggtatagctatactgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gatggagtctcctacgtcgtcgacggtgctccgtttgagttcaggtatagctatactgag 483
Query: 481 accccggctgagaagccggttgagatacgtgaaccggtagcgccatttggaccggatacg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 accccggctgagaagccggttgagatacgtgaaccggtagcgccatttggaccggatacn 543
Query: 541 gtaccgcggccgtggaccggtcggaacccgct 572
||||||||||||||||||||||||||||||||
Sbjct: 544 gtaccgcggccgtggaccggtcggaacccgct 575
>gnl|LJGI|BP082894
Length = 326
Score = 281 bits (142), Expect = 9e-75
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 1935 gctacctagaaaggttgtggtgcaaaaatgtgacaaccaagaaggttcaacattggagac 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gctacctagaaaggttgtggtgcaaaaatgtgacaaccaagaaggttcaacattggagac 267
Query: 1995 aaaaggaattaccactgttatgatgaaaggtgaaaaaatggagaccagctctaaaattag 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aaaaggaattaccactgttatgatgaaaggtgaaaaaatggagaccagctctaaaattag 207
Query: 2055 gagaaaagaggattttggggag 2076
||||||||||||||||||||||
Sbjct: 206 gagaaaagaggattttggggag 185