Miyakogusa Predicted Gene
- Lj0g3v0265599.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0265599.1 Non Chatacterized Hit- tr|Q0WR39|Q0WR39_ARATH
Putative uncharacterized protein OS=Arabidopsis thalia,36.36,3.6,
,gene.g20622.t1.1
(286 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71222 similar to UniRef100_A2Q1B8 Cluster: Homeobox d... 357 2e-98
gnl|LJGI|TC72531 similar to UniRef100_A7NUQ6 Cluster: Chromosome... 54 5e-07
gnl|LJGI|TC81711 similar to UniRef100_A7NUQ6 Cluster: Chromosome... 52 2e-06
gnl|LJGI|TC75814 similar to UniRef100_Q9ARE4 Cluster: ZF-HD home... 52 2e-06
>gnl|LJGI|TC71222 similar to UniRef100_A2Q1B8 Cluster: Homeobox domain, ZF-HD class;
ZF-HD homeobox protein Cys/His-rich dimerisation region;
Homeodomain-like; n=1; Medicago truncatula|Rep: Homeobox
domain, ZF-HD class; ZF-HD homeobox protein Cys/His-rich
dimerisation region; Homeodomain-like - Medicago
truncatula (Barrel medic), partial (18%)
Length = 598
Score = 357 bits (180), Expect = 2e-98
Identities = 266/298 (89%), Gaps = 15/298 (5%)
Strand = Plus / Minus
Query: 4 gttctggtagtgatgatgaattggatcctcagcaccatggttgcaattcccattgccatt 63
||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 341 gttctggaagtgatgatgaattggatcctcagcaccatggttgcgatttccattgccatt 282
Query: 64 gatttcagagatgttgctattgttgttgataacaaggtcatgattttcctttgcaaaaga 123
|||||||||| | ||||| ||||| |||||||| ||||||||||||||||||||||| |
Sbjct: 281 gatttcagaggcgctgctaatgttggtgataacagggtcatgattttcctttgcaaaaaa 222
Query: 124 gctctttgcaaaaccagcattgttgat---------------gttgttgttgatttcgtt 168
||||| ||| |||||||||||||||| ||||||||||||||||||
Sbjct: 221 actcttagcagaaccagcattgttgatattgttgttgatgttgttgttgttgatttcgtt 162
Query: 169 gctaccatctctcttcccaaaagtgttcttgttgttgtgcatccaaactttgagaaccca 228
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 161 gctaccatctctcttcccaaaagtgttcttgttgttatgcatccaaactttgagaacccc 102
Query: 229 tctttcaattccaatctcgttgaagaaattctgaacaaaatcctcgtccttcttctgc 286
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 101 tctttcaattccaatctcgttgcagaaatcctgaacaaaatcctcgtccttcttctgc 44
>gnl|LJGI|TC72531 similar to UniRef100_A7NUQ6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 1297
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 191 gtgttcttgttgttgtgcatccaaactttgagaac 225
||||||||||| |||||||||||||| ||||||||
Sbjct: 995 gtgttcttgttattgtgcatccaaaccttgagaac 961
>gnl|LJGI|TC81711 similar to UniRef100_A7NUQ6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 840
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 180 tcttcccaaaagtgttcttgttgttgtgcatccaaactttgagaac 225
|||| |||| ||||| ||||||||| ||||||||||| ||||||||
Sbjct: 350 tcttaccaagagtgtgcttgttgttatgcatccaaaccttgagaac 305
>gnl|LJGI|TC75814 similar to UniRef100_Q9ARE4 Cluster: ZF-HD homeobox protein; n=1;
Flaveria bidentis|Rep: ZF-HD homeobox protein - Flaveria
bidentis (Coastalplain yellowtops), partial (22%)
Length = 519
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 180 tcttcccaaaagtgttcttgttgttgtgcatccaaactttgagaac 225
|||| |||| ||||| ||||||||| ||||||||||| ||||||||
Sbjct: 148 tcttaccaagagtgtgcttgttgttatgcatccaaaccttgagaac 103