Miyakogusa Predicted Gene

Lj0g3v0265559.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0265559.1 Non Chatacterized Hit- tr|I1MTS4|I1MTS4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27624 PE,73.94,0,EB1
dimerisation domain-like,NULL; Calponin-homology domain,
CH-domain,Calponin homology domain; no ,CUFF.17509.1
         (600 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62647 similar to UniRef100_A7QEG4 Cluster: Chromosome...   440   e-123
gnl|LJGI|TC77924                                                      412   e-114

>gnl|LJGI|TC62647 similar to UniRef100_A7QEG4 Cluster: Chromosome chr1 scaffold_84,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_84, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (50%)
          Length = 815

 Score =  440 bits (222), Expect = e-123
 Identities = 228/230 (99%)
 Strand = Plus / Plus

                                                                       
Query: 8   agcatattgaagttagcaggcttgttaaaggtcggccattggataacttagagttcctac 67
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 586 agcatattgaagttagcaggcttgttaaaggtcggccattggataacttaaagttcctac 645

                                                                       
Query: 68  agtggatgaagcgttactgtgattctgtcaatggtggcattatgaacgagaactataatc 127
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 646 agtggatgaagcgttactgtgattctgtcaatggtggcattatgaacgaaaactataatc 705

                                                                       
Query: 128 ctgtggagcgtaggtgtaagggtggaaaggaccgaaataataggagtttaaaaagtgcaa 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ctgtggagcgtaggtgtaagggtggaaaggaccgaaataataggagtttaaaaagtgcaa 765

                                                             
Query: 188 agtcgctgccggtaaatactatgaataattctggttcaggccatacactc 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 agtcgctgccggtaaatactatgaataattctggttcaggccatacactc 815


>gnl|LJGI|TC77924 
          Length = 601

 Score =  412 bits (208), Expect = e-114
 Identities = 247/256 (96%), Gaps = 3/256 (1%)
 Strand = Plus / Plus

                                                                       
Query: 348 actctcagtggatctcttggaaaaagaacgagacttttacttttcaaaactaagggatat 407
           ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 1   actctcagtggatctcttggaaaaagaacgagacttttacttttccaacctaagggatat 60

                                                                       
Query: 408 agaaattctttgtcaaactacagaactggagaatgaacctatgtctgtagcagttaaaaa 467
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61  agaaattctttgtccaactacagaactggagaatgaacctatgtctgtagcagttacaaa 120

                                                                       
Query: 468 gattttgtatgccgctgatgcatctgaatcaccatta-ga-ggaagctcaggagtacctt 525
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 121 gattttgtatgccgctgatgcatctgaatcaccattacgacggaagctcaggagtacctt 180

                                                                       
Query: 526 aatcaaactttgcatgctgttgaagaagaaccagaacccgaaccagaa-ccagaaactga 584
           ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 181 aatcaaactttgcatgctgttgaagaagaaccagaccccgaaccagaacccagaaactga 240

                           
Query: 585 aactgaagcttgatca 600
           || |||||||||||||
Sbjct: 241 aagtgaagcttgatca 256