Miyakogusa Predicted Gene
- Lj0g3v0265419.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0265419.1 Non Chatacterized Hit- tr|B3L6I4|B3L6I4_PLAKH
Guanidine nucleotide exchange factor, putative
OS=Plas,30.77,1.8,seg,NULL,CUFF.17499.1
(468 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC594542 UniRef100_Q3R1B8 Cluster: Phosphoribosylformyl... 163 1e-39
gnl|LJGI|DC594391 137 7e-32
gnl|LJGI|DC597870 homologue to UniRef100_Q9S740 Cluster: Lysine-... 123 1e-27
gnl|LJGI|FS319167 94 9e-19
gnl|LJGI|BP057797 similar to UniRef100_Q0JNR3 Cluster: Os01g0270... 78 5e-14
gnl|LJGI|DC599165 similar to UniRef100_A3MWL7 Cluster: Extracell... 64 8e-10
gnl|LJGI|BP057899 54 8e-07
gnl|LJGI|BP080441 similar to UniRef100_Q08661 Cluster: Surface g... 52 3e-06
gnl|LJGI|BP040242 homologue to UniRef100_A7Q166 Cluster: Chromos... 52 3e-06
gnl|LJGI|TC60814 homologue to UniRef100_A7Q166 Cluster: Chromoso... 52 3e-06
>gnl|LJGI|DC594542 UniRef100_Q3R1B8 Cluster: Phosphoribosylformylglycinamidine
cyclo-ligase; n=1; Xylella fastidiosa Ann-1|Rep:,
partial (3%)
Length = 317
Score = 163 bits (82), Expect = 1e-39
Identities = 106/114 (92%), Gaps = 5/114 (4%)
Strand = Plus / Plus
Query: 360 aatccctaattctccaccttggcttgtaattctaaatcctatgcctactccttcaaa--- 416
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 190 aatccctaattctccaccttggcttgtaattctatatcctattcctactccttcaaacct 249
Query: 417 --cctcgccttgccttcccttggtatgcaggtattttgttttgttccttcttga 468
||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 250 cgcctcgccttgccttcccttcgtatgcaggtattttgttttgttccttcttga 303
Score = 89.7 bits (45), Expect = 1e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 239 ttcacgctcaccactaccagtcaccacgcccagacgccctcaccc 283
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcacgctcaccactaccagtcaccacgcccagacgccctcaccc 45
>gnl|LJGI|DC594391
Length = 592
Score = 137 bits (69), Expect = 7e-32
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 370 tctccaccttggcttgtaattctaaatcctatgcctactccttcaaacctcgccttgcct 429
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 292 tctccaccttggcttgtaattctaaatcctattcctaatccttcaaacctcgccttgcct 351
Query: 430 tcccttggtatgcaggtattt 450
|||||| ||||||||||||||
Sbjct: 352 tcccttcgtatgcaggtattt 372
Score = 63.9 bits (32), Expect = 8e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 302 caccagtccagttctcctttctcttctcaagcttga 337
||||||||||||||||||||||||||| ||||||||
Sbjct: 161 caccagtccagttctcctttctcttctaaagcttga 196
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 335 tgaatatgattttccctaaatctggaatccctaat 369
|||||||||||| ||||||||||||||||||||||
Sbjct: 213 tgaatatgatttcccctaaatctggaatccctaat 247
>gnl|LJGI|DC597870 homologue to UniRef100_Q9S740 Cluster: Lysine-rich arabinogalactan
protein 19 precursor; n=1; Arabidopsis thaliana|Rep:
Lysine-rich arabinogalactan protein 19 precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (5%)
Length = 366
Score = 123 bits (62), Expect = 1e-27
Identities = 86/94 (91%), Gaps = 5/94 (5%)
Strand = Plus / Plus
Query: 360 aatccctaattctccaccttggcttgtaattctaaatcctatgcctactccttcaaacct 419
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 212 aatccctaattctccaccttggcttgtaattctatatcctattcctactccttcaaacct 271
Query: 420 c-----gccttgccttcccttggtatgcaggtat 448
| ||||||||||||||| ||||||||||||
Sbjct: 272 cgcctggccttgccttcccttcgtatgcaggtat 305
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 241 cacgctcaccactaccagtcaccacgcccagacgccctcaccc 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 cacgctcaccactaccagtcaccacgcccagacgccctcaccc 68
>gnl|LJGI|FS319167
Length = 609
Score = 93.7 bits (47), Expect = 9e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 370 tctccaccttggcttgtaattctaaatcctatgcctactccttcaaacctcgccttgcct 429
|||||| ||||||||||||||||||||| ||| |||||||||||||||||||||| ||||
Sbjct: 177 tctccatcttggcttgtaattctaaatcatattcctactccttcaaacctcgcctcgcct 118
Query: 430 tcccttg 436
| |||||
Sbjct: 117 tgccttg 111
Score = 67.9 bits (34), Expect = 5e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 335 tgaatatgattttccctaaatctggaatccctaattct 372
||||||||||||||||||||||||||| ||||||||||
Sbjct: 243 tgaatatgattttccctaaatctggaagccctaattct 206
Score = 63.9 bits (32), Expect = 8e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 302 caccagtccagttctcctttctcttctcaagcttga 337
|||||||||| |||||||||||||||||||||||||
Sbjct: 295 caccagtccaattctcctttctcttctcaagcttga 260
>gnl|LJGI|BP057797 similar to UniRef100_Q0JNR3 Cluster: Os01g0270000 protein; n=1;
Oryza sativa Japonica Group|Rep: Os01g0270000 protein -
Oryza sativa subsp. japonica (Rice), partial (9%)
Length = 255
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 417 cctcgccttgccttcccttggtatgcaggtattttgttttgttccttcttg 467
||||||||| ||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 101 cctcgccttcccttcccttcgtatgcaggtattttgttttgtttcttcttg 151
>gnl|LJGI|DC599165 similar to UniRef100_A3MWL7 Cluster: Extracellular solute-binding
protein, family 1 precursor; n=1; Pyrobaculum
calidifontis JCM 11548|Rep: Extracellular solute-binding
protein, family 1 precursor - Pyrobaculum calidifontis
(strain JCM 11548 / VA1), partial (4%)
Length = 426
Score = 63.9 bits (32), Expect = 8e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 428 cttcccttggtatgcaggtattttgttttgttccttcttg 467
|||||||| ||||||||||||||||||||||| |||||||
Sbjct: 136 cttcccttcgtatgcaggtattttgttttgtttcttcttg 175
>gnl|LJGI|BP057899
Length = 469
Score = 54.0 bits (27), Expect = 8e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 1 atgtgcaaccatacacaagttttta-ttgtgcatattaaatttttcc 46
||||||||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 15 atgtgcaaccatacacaagtttttacttgtgtaggttaaatttttcc 61
>gnl|LJGI|BP080441 similar to UniRef100_Q08661 Cluster: Surface glycoprotein; n=1;
Trypanosoma cruzi|Rep: Surface glycoprotein -
Trypanosoma cruzi, partial (2%)
Length = 382
Score = 52.0 bits (26), Expect = 3e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 1 atgtgcaaccatacacaagttttta-ttgtgcat 33
||||||||||||||||||||||||| ||||||||
Sbjct: 35 atgtgcaaccatacacaagtttttacttgtgcat 2
>gnl|LJGI|BP040242 homologue to UniRef100_A7Q166 Cluster: Chromosome chr10
scaffold_43, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (44%)
Length = 498
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 303 accagtccagttctcctttctcttctcaag 332
||||||||||||| ||||||||||||||||
Sbjct: 12 accagtccagttcacctttctcttctcaag 41
>gnl|LJGI|TC60814 homologue to UniRef100_A7Q166 Cluster: Chromosome chr10
scaffold_43, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (80%)
Length = 869
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 303 accagtccagttctcctttctcttctcaag 332
||||||||||||| ||||||||||||||||
Sbjct: 111 accagtccagttcacctttctcttctcaag 140