Miyakogusa Predicted Gene
- Lj0g3v0265109.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0265109.1 tr|G7IKW7|G7IKW7_MEDTR SNW domain-containing
protein OS=Medicago truncatula GN=MTR_2g030450 PE=4
SV=,85.93,0,seg,NULL; SKIP_SNW,SKI-interacting protein SKIP, SNW
domain; NUCLEAR PROTEIN SKIP-RELATED,SKI-intera,CUFF.17517.1
(1573 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62820 homologue to UniRef100_Q3I4X9 Cluster: GAMYB-bi... 991 0.0
gnl|LJGI|TC82121 similar to UniRef100_Q3I4X9 Cluster: GAMYB-bind... 678 0.0
gnl|LJGI|TC69960 similar to UniRef100_Q3I4X9 Cluster: GAMYB-bind... 595 e-169
gnl|LJGI|GO025383 similar to UniRef100_Q3I4X9 Cluster: GAMYB-bin... 559 e-158
gnl|LJGI|AV767709 homologue to UniRef100_Q3I4X9 Cluster: GAMYB-b... 385 e-106
>gnl|LJGI|TC62820 homologue to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (33%)
Length = 999
Score = 991 bits (500), Expect = 0.0
Identities = 576/600 (96%), Gaps = 1/600 (0%)
Strand = Plus / Plus
Query: 972 gcggcgcaaggagagggagagggagagaagattggaggctaaggatgctgcaatgggaaa 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcggcgcaaggagagggagagggagagaagattggaggctaaggatgctgcaatgggaaa 60
Query: 1032 gaagagtaagatcacaagagatagggatcgtgatataagtgagaaagttgctcttggtat 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagagtaagatcacaagagatagggatcgtgatataagtgagaaagttgctcttggtat 120
Query: 1092 ggctactgctaagacagggacagaggtcatgtatgatgaga-ggctattcaaccaggatc 1150
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 ggctactgctaagacagggacagaggtcatgtatgatgagacggctattcaaccaggatc 180
Query: 1151 aagggatgtcatctgggtttgccactgatgatcaatataatgtgtacgataaaggcttgt 1210
||||||||||||||||||||| |||||||||||| ||||||||||| || ||||||||||
Sbjct: 181 aagggatgtcatctgggtttggcactgatgatcagtataatgtgtatgacaaaggcttgt 240
Query: 1211 ttactgcacagccaacgctttcaaccctgtataggccaaagaaggatgttgacaatgaga 1270
||||||| |||||||| || |||||||||||||||||||||||||||||||| || ||||
Sbjct: 241 ttactgctcagccaacactctcaaccctgtataggccaaagaaggatgttgataacgaga 300
Query: 1271 cttatggaggtgctgatgagcaactagagaagattatgaagactgatcgctttaagccag 1330
||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttatggaggtgccgatgaacagctagagaagattatgaagactgatcgctttaagccag 360
Query: 1331 acaaagcattttctggggcttctgaaagggcaggtccaagggataggccggttgagtttg 1390
||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 361 acaaagcattttcaggtgcttctgaaagggcaggtccaagggataggccggttgaatttg 420
Query: 1391 agaatgaagaagctgatccatttggtctggatcagttcttgacggaggtgaagaagggta 1450
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 421 agaatgaagaagctgatccatttggtctggatcagttcttgacagaggtcaagaagggta 480
Query: 1451 agaaggccatggagaaagtgggcggtggaggaactatgaaagcaagtgccggatcttcaa 1510
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 481 agaaggccatggagaaagtgggtggtggaggaactatgaaagcaagtgctggatcttcaa 540
Query: 1511 tgcgggacggttatgagggaggttcgagtaggactcgcattggatttgaaaggggacatt 1570
|| |||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 541 tgagggatggttacgagggaggttctagtaggactcgcattggatttgaaaggggacatt 600
>gnl|LJGI|TC82121 similar to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (31%)
Length = 837
Score = 678 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Plus
Query: 1 atgggaagggataaatcctcgaaaaccggttccaagattctgccagtaactgttgatgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atgggaagggataaatcctcgaaaaccggttccaagattctgccagtaactgttgatgcg 555
Query: 61 catgggaatgttgcttatgatgccatagtgaagcagaatgagaatgctaagaaaattgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 catgggaatgttgcttatgatgccatagtgaagcagaatgagaatgctaagaaaattgtg 615
Query: 121 tacacgcagcagaaggatttgataccgaagattttgaagaatgaagaagatgatgggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tacacgcagcagaaggatttgataccgaagattttgaagaatgaagaagatgatgggatg 675
Query: 181 gatgaggatgaggatgtgcagaaagagattgaggaaaccatgcaggaaactaaagctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gatgaggatgaggatgtgcagaaagagattgaggaaaccatgcaggaaactaaagctgct 735
Query: 241 cttgagaagatagttaatgtcagactcagtgcggcgcagccgaagaatgttgccaagcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 cttgagaagatagttaatgtcagactcagtgcggcgcagccgaagaatgttgccaagcaa 795
Query: 301 tcatcggattcgaagtatattaagtacaagccttcgcagcag 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tcatcggattcgaagtatattaagtacaagccttcgcagcag 837
>gnl|LJGI|TC69960 similar to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (42%)
Length = 858
Score = 595 bits (300), Expect = e-169
Identities = 491/554 (88%), Gaps = 3/554 (0%)
Strand = Plus / Plus
Query: 1 atgggaagggataaatcctcgaaaaccggttccaagattctgccagtaactgttgatgcg 60
||||||||||| || || || ||| |||||||||||||||| || || || || || ||
Sbjct: 305 atgggaagggacaagtcatcaaaacccggttccaagattcttcctgtgaccgtcgacgct 364
Query: 61 catgggaatgttgcttatgatgccatagtgaagcagaatgagaatgctaagaaaattgtg 120
|| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 365 cacgggaatgttgcctatgatgccatagtgaagcagaatgagaacgctaagaaaatcgtg 424
Query: 121 tacacgcagcagaaggatttgataccgaagattttgaagaatgaagaagatgatggg--- 177
|||||||||||||||||| | ||||||||||| |||||||| |||||||| ||||
Sbjct: 425 tacacgcagcagaaggatctaataccgaagatattgaagaacgaagaagaatatggtgac 484
Query: 178 atggatgaggatgaggatgtgcagaaagagattgaggaaaccatgcaggaaactaaagct 237
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 485 atggatgaggatgaggatgtgcagaaagagattgatgaaaccatgcaggaaactaaagct 544
Query: 238 gctcttgagaagatagttaatgtcagactcagtgcggcgcagccgaagaatgttgccaag 297
||||||||||||||||||||||| |||||||||||||||||||| || |||||| |||||
Sbjct: 545 gctcttgagaagatagttaatgtgagactcagtgcggcgcagcctaaaaatgttcccaag 604
Query: 298 caatcatcggattcgaagtatattaagtacaagccttcgcagcagagtgcggcattcaat 357
||||| || ||| | |||||||| |||||||||||||| ||||| || || || ||||||
Sbjct: 605 caatcctctgatgctaagtatatcaagtacaagccttcacagcaaagcgcagctttcaat 664
Query: 358 tccggggcgaaggagagggtgattaggatggttgagatgccggtggatccacttgagcct 417
| ||||| ||||||||||||||||||||| | |||||||| |||||||| || ||||||
Sbjct: 665 acgggggcaaaggagagggtgattaggatgatggagatgcccgtggatccgctcgagcct 724
Query: 418 ccgaagttcaagcataagcgtgttcctaaggcttctggttcgcctccggtgccggttatg 477
|| ||||| ||||||||||||||||||||||||||||| || ||||||||||| || |||
Sbjct: 725 ccaaagtttaagcataagcgtgttcctaaggcttctggctcccctccggtgccagtgatg 784
Query: 478 cattcgccgcctaggcctgttactgtgaaggatcaacaagattggaagatacctccttgt 537
||||| || | ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 785 cattcaccttcgaggcctgttactgtgaaggatcagcaagattggaagatacccccttgc 844
Query: 538 atttcgaattggaa 551
||||| ||||||||
Sbjct: 845 atttcaaattggaa 858
>gnl|LJGI|GO025383 similar to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (11%)
Length = 293
Score = 559 bits (282), Expect = e-158
Identities = 288/290 (99%)
Strand = Plus / Plus
Query: 714 gaaggagatgcttttgaaggagaaggaaaggaaggagcaggagctgagggctttggcgca 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaaggagatgcttttgaaggagaaggaaaggaaggagcaggagctgagggctttggcgca 61
Query: 774 gaaagctcgttctgagagaactggcgtggcccctccagctgctgtttctgctgtttctat 833
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 62 gaaagctcgttctgagagaactggcgtggcccctccagctgttgtttctgctgtttctat 121
Query: 834 gagtatggagaagagcagtgtggaagatgctgatatgagaggtgattatgagcatccaag 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gagtatggagaagagcagtgtggaagatgctgatatgagaggtgattatgagcatccaag 181
Query: 894 ggaaagggagaagaattttccaaaggagtcgagggaagagagggaggatcggctgcagcg 953
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggaaagggagaggaattttccaaaggagtcgagggaagagagggaggatcggctgcagcg 241
Query: 954 tgaaaagattcgtgaggagcggcgcaaggagagggagagggagagaagat 1003
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgaaaagattcgtgaggagcggcgcaaggagagggagagggagagaagat 291
>gnl|LJGI|AV767709 homologue to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (10%)
Length = 540
Score = 385 bits (194), Expect = e-106
Identities = 194/194 (100%)
Strand = Plus / Minus
Query: 1380 ggttgagtttgagaatgaagaagctgatccatttggtctggatcagttcttgacggaggt 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ggttgagtttgagaatgaagaagctgatccatttggtctggatcagttcttgacggaggt 481
Query: 1440 gaagaagggtaagaaggccatggagaaagtgggcggtggaggaactatgaaagcaagtgc 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gaagaagggtaagaaggccatggagaaagtgggcggtggaggaactatgaaagcaagtgc 421
Query: 1500 cggatcttcaatgcgggacggttatgagggaggttcgagtaggactcgcattggatttga 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cggatcttcaatgcgggacggttatgagggaggttcgagtaggactcgcattggatttga 361
Query: 1560 aaggggacattaag 1573
||||||||||||||
Sbjct: 360 aaggggacattaag 347