Miyakogusa Predicted Gene
- Lj0g3v0265009.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0265009.1 tr|A9PAL7|A9PAL7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595591 PE=2
SV=1,35.57,3e-19,seg,NULL; UGPI4_ARATH_Q84MC0;,NULL,CUFF.17492.1
(603 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59513 similar to UniRef100_A7NWI1 Cluster: Chromosome... 1195 0.0
gnl|LJGI|TC60794 similar to UniRef100_A7NWI1 Cluster: Chromosome... 165 4e-40
>gnl|LJGI|TC59513 similar to UniRef100_A7NWI1 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (73%)
Length = 767
Score = 1195 bits (603), Expect = 0.0
Identities = 603/603 (100%)
Strand = Plus / Plus
Query: 1 atggtgttgcccaagttctctctgctcttctggcttctcctttctttcaatgtcattctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 atggtgttgcccaagttctctctgctcttctggcttctcctttctttcaatgtcattctc 111
Query: 61 ttgataaattacccaactgaatgtgctgatgatgagaaagataacctttatcagggtatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 ttgataaattacccaactgaatgtgctgatgatgagaaagataacctttatcagggtatc 171
Query: 121 aataagtatcgagcatcaataaacctgaaagctctagcaaagaatgaaaatgctgattgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aataagtatcgagcatcaataaacctgaaagctctagcaaagaatgaaaatgctgattgt 231
Query: 181 cttgctgatcaaatagctgaacaattcaagaatcaaccctgcacaaacaccacaggtgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cttgctgatcaaatagctgaacaattcaagaatcaaccctgcacaaacaccacaggtgct 291
Query: 241 aacacagtcccagggacagagcctcaattctccaactacccaaaccttttagctaaatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aacacagtcccagggacagagcctcaattctccaactacccaaaccttttagctaaatgc 351
Query: 301 cacttggctatttccgacacacaggacagaactgtcatgcctgcttgtgttcctaacctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cacttggctatttccgacacacaggacagaactgtcatgcctgcttgtgttcctaacctg 411
Query: 361 gttccgagcctcgtcctctcgaatttcacgggatctctttattcagatagtctcaacgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gttccgagcctcgtcctctcgaatttcacgggatctctttattcagatagtctcaacgac 471
Query: 421 acaaagtacacaggaattggaattggttcagaagataactggattgttgttgtcttaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 acaaagtacacaggaattggaattggttcagaagataactggattgttgttgtcttaacc 531
Query: 481 accaatacacctgcaggaaactttgctccatatagttctaatggtgccaatttgatttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 accaatacacctgcaggaaactttgctccatatagttctaatggtgccaatttgatttcc 591
Query: 541 aaaatgggattgattcattgttcaatgctagtattagttggcatcgttttcctgttatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aaaatgggattgattcattgttcaatgctagtattagttggcatcgttttcctgttatga 651
Query: 601 aac 603
|||
Sbjct: 652 aac 654
>gnl|LJGI|TC60794 similar to UniRef100_A7NWI1 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 1238
Score = 165 bits (83), Expect = 4e-40
Identities = 260/319 (81%)
Strand = Plus / Plus
Query: 152 ctctagcaaagaatgaaaatgctgattgtcttgctgatcaaatagctgaacaattcaaga 211
||||| |||||||||||||||| |||| ||||||| |||||||||| || |||||||
Sbjct: 346 ctctaacaaagaatgaaaatgcaaattgctttgctgacaaaatagctgaccagttcaaga 405
Query: 212 atcaaccctgcacaaacaccacaggtgctaacacagtcccagggacagagcctcaattct 271
| || || || ||||||||||||||||||||||| || ||||| || |||||||| |||
Sbjct: 406 agcagccttgtacaaacaccacaggtgctaacacggttccaggcaccgagcctcagttcg 465
Query: 272 ccaactacccaaaccttttagctaaatgccacttggctatttccgacacacaggacagaa 331
||||| ||||| |||||| |||||||| | ||| |||||| ||||| ||| ||
Sbjct: 466 ataactatccaaaacttttaactaaatgcaagttgaacatttccaacacaagggatggat 525
Query: 332 ctgtcatgcctgcttgtgttcctaacctggttccgagcctcgtcctctcgaatttcacgg 391
|||| |||||||||||||||||| ||||||| | | | || ||| | ||||||||
Sbjct: 526 ctgtaatgcctgcttgtgttcctggcctggtttccacagttgttctcactaatttcactc 585
Query: 392 gatctctttattcagatagtctcaacgacacaaagtacacaggaattggaattggttcag 451
|||||| || ||| | | |||||| ||| | ||||||||||||||||| ||||||||||
Sbjct: 586 aatctctctactcacaaaatctcaatgactctaagtacacaggaattggtattggttcag 645
Query: 452 aagataactggattgttgt 470
|||||||||||||||||||
Sbjct: 646 aagataactggattgttgt 664