Miyakogusa Predicted Gene

Lj0g3v0264869.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0264869.2 tr|A2Q3V3|A2Q3V3_MEDTR C-5 cytosine-specific DNA
methylase; Vacuolar protein sorting-associated prot,78.94,0,GB DEF:
VPS13-LIKE PROTEIN,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
(VPS13),Vacuolar protei,CUFF.17733.2
         (3837 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV777242 similar to UniRef100_A2Q3V3 Cluster: C-5 cytos...   712   0.0  

>gnl|LJGI|AV777242 similar to UniRef100_A2Q3V3 Cluster: C-5 cytosine-specific DNA
            methylase; Vacuolar protein sorting- associated protein;
            n=1; Medicago truncatula|Rep: C-5 cytosine-specific DNA
            methylase; Vacuolar protein sorting- associated protein -
            Medicago truncatula (Barrel medic), partial (8%)
          Length = 407

 Score =  712 bits (359), Expect = 0.0
 Identities = 395/407 (97%)
 Strand = Plus / Plus

                                                                        
Query: 2428 aaaagggtatatgatcatagccaagtcaggcctgcagaatataaggagaaaatatcaatt 2487
            |||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 1    aaaaggttatgtgatcatagccaagttaggcctgcagaatataaggagaaaatatcgatt 60

                                                                        
Query: 2488 tgtattcaatatattgggatttctttgattaattcatacccacaggaattgctttttgcc 2547
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tgtattcaatatattgggatctctttgattaattcatacccacaggaattgctttttgcc 120

                                                                        
Query: 2548 tgtattaaagatatagaaataaacctcctgcaaagtttggatcgccaaaggctttccatg 2607
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tgtattaaagatatagaaataaacctcctgcaaagtttggatcgccaaaggctttccatg 180

                                                                        
Query: 2608 atgatatcatttatacaaattgacaaccagttgcactctactccatatccagttttgttg 2667
            ||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 181  atgatatcattcatacaaattgacaaccagttgcgctctactccctatccagttttgttg 240

                                                                        
Query: 2668 tccttcaataatggatataggtcctgccaagttgacaatacaaagtcgagggatgatgtc 2727
            |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 241  tccttcaataatggatatagatcctgccaagttgacaacacaaagtcgagggatgatgtc 300

                                                                        
Query: 2728 atgagaacaagtattgaaaaattaaatcagaagagtttcggaagcagctcttctaatcct 2787
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301  atgagaacaagaattgaaaaattaaatcagaagagtttcggaagcagctcttctactcct 360

                                                           
Query: 2788 gtgatgtgcttagaaatttcaaaatggaggaagaaagacatttcatt 2834
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gtgatgtgcttagaaatttcaaaatggaggaagaaagacatttcatt 407