Miyakogusa Predicted Gene

Lj0g3v0264849.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0264849.1 tr|G7IJW3|G7IJW3_MEDTR Vacuolar protein
sorting-associated protein OS=Medicago truncatula
GN=MTR_2g0,65.39,0,seg,NULL; GB DEF: VPS13-LIKE PROTEIN,NULL; VACUOLAR
PROTEIN SORTING-ASSOCIATED PROTEIN (VPS13),Vacuo,CUFF.17732.1
         (1731 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74894 similar to UniRef100_A2Q3V2 Cluster: TonB box, ...    68   2e-10

>gnl|LJGI|TC74894 similar to UniRef100_A2Q3V2 Cluster: TonB box, N-terminal; n=1;
            Medicago truncatula|Rep: TonB box, N-terminal - Medicago
            truncatula (Barrel medic), partial (14%)
          Length = 463

 Score = 67.9 bits (34), Expect = 2e-10
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                              
Query: 1698 tatattgtcttcttctgaaggattggttcttaca 1731
            ||||||||||||||||||||||||||||||||||
Sbjct: 2    tatattgtcttcttctgaaggattggttcttaca 35