Miyakogusa Predicted Gene

Lj0g3v0264609.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0264609.1 Non Chatacterized Hit- tr|I1NHW4|I1NHW4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2903
PE=,97.87,1e-17,CHAPERONIN-60KDA, CH60,NULL; CHAPERONIN,Chaperonin
Cpn60/TCP-1,NODE_15647_length_163_cov_172.061356.path1.1
         (141 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69512 homologue to UniRef100_Q1RSH3 Cluster: GroEL-li...   240   2e-63
gnl|LJGI|TC62942 similar to UniRef100_Q93ZM7 Cluster: Chaperonin...    50   3e-06

>gnl|LJGI|TC69512 homologue to UniRef100_Q1RSH3 Cluster: GroEL-like chaperone,
           ATPase; n=1; Medicago truncatula|Rep: GroEL-like
           chaperone, ATPase - Medicago truncatula (Barrel medic),
           partial (37%)
          Length = 757

 Score =  240 bits (121), Expect = 2e-63
 Identities = 136/141 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaatgcaatggacctgaggcgaggtataaatatggcggttgattcggtggtgacaaac 60
           ||||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||
Sbjct: 539 atgaatgcaatggacctgaggcgaggtattaatatggctgttgattctgtggtcacaaac 598

                                                                       
Query: 61  ctgaagagcagagcacgaatgattagtacttctgaagaaatagctcaggttgggacaata 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 599 ctgaagagcagagcacgaatgattagcacttctgaagaaatagctcaggttgggacaata 658

                                
Query: 121 tctgctaatggggagagagag 141
           |||||||||||||||||||||
Sbjct: 659 tctgctaatggggagagagag 679


>gnl|LJGI|TC62942 similar to UniRef100_Q93ZM7 Cluster: Chaperonin CPN60-like 2,
           mitochondrial precursor; n=2; Brassicaceae|Rep:
           Chaperonin CPN60-like 2, mitochondrial precursor -
           Arabidopsis thaliana (Mouse-ear cress), partial (55%)
          Length = 1212

 Score = 50.1 bits (25), Expect = 3e-06
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 67  agcagagcacgaatgattagtacttctgaagaaatagctcaggttgggacaatatctgct 126
           |||||||||  |||||| || ||  ||||||| ||| | |||||||| || |||||||||
Sbjct: 544 agcagagcagtaatgataagcacacctgaagagataacccaggttggaaccatatctgct 603

                    
Query: 127 aatggggag 135
           |||||||||
Sbjct: 604 aatggggag 612