Miyakogusa Predicted Gene
- Lj0g3v0264369.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0264369.2 Non Chatacterized Hit- tr|I1N6M9|I1N6M9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6621
PE=,94.59,0,TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT DELTA,NULL;
TRANSLATION INITIATION FACTOR EIF-2B,Initia,CUFF.17443.2
(561 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65803 similar to UniRef100_A7PAL4 Cluster: Chromosome... 1088 0.0
gnl|LJGI|BP070946 similar to UniRef100_Q0DQ10 Cluster: Os03g0645... 232 2e-60
gnl|LJGI|TC58396 similar to UniRef100_A7PAL4 Cluster: Chromosome... 113 1e-24
>gnl|LJGI|TC65803 similar to UniRef100_A7PAL4 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 790
Score = 1088 bits (549), Expect = 0.0
Identities = 558/561 (99%)
Strand = Plus / Plus
Query: 1 atgattcttttgcacgcacatgaattaggaaaacaatttcgtgtcgtggttgttgactct 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6 atgattcttttgcacgcacatgaattaggaaaacaatttcgtgccgtggttgttgactct 65
Query: 61 cgtccaaagctaagagggaaacttttacttcgcaagcttgtggagaaaggtcttagctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 cgtccaaagctaagagggaaacttttacttcgcaagcttgtggagaaaggtcttagctgt 125
Query: 121 acatacactcatataaatgctgtttcctacataatgcatgaagttactagagtttttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 acatacactcatataaatgctgtttcctacataatgcatgaagttactagagtttttctg 185
Query: 181 ggtgcttcatcagtcttgtctaacggaactgtatattcaagagttgggactgcatgtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ggtgcttcatcagtcttgtctaacggaactgtatattcaagagttgggactgcatgtgtt 245
Query: 241 gcaatggttgctcatgcattccgtgtacctgtcatagtttgttgtgaggcctataaattt 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gcagtggttgctcatgcattccgtgtacctgtcatagtttgttgtgaggcctataaattt 305
Query: 301 catgagagagtacagctggattcaatatgctcgaatgaactcggtgatccagatatcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 catgagagagtacagctggattcaatatgctcgaatgaactcggtgatccagatatcatt 365
Query: 361 tcaaatgtgctgggtagagaggatgtcaactacttggatggttgggctgatattgaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tcaaatgtgctgggtagagaggatgtcaactacttggatggttgggctgatattgaaaat 425
Query: 421 ctgcaacttttaaatctgatttatgatgcgactccttcagattatgtctcaatgatagtc 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ccgcaacttttaaatctgatttatgatgcgactccttcagattatgtctcaatgatagtc 485
Query: 481 acagattatggcatggttcctcccacaagtgtgcctgtaattgtaagagaatatgggaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 acagattatggcatggttcctcccacaagtgtgcctgtaattgtaagagaatatgggaaa 545
Query: 541 gaacaggtctggatataaaat 561
|||||||||||||||||||||
Sbjct: 546 gaacaggtctggatataaaat 566
>gnl|LJGI|BP070946 similar to UniRef100_Q0DQ10 Cluster: Os03g0645200 protein; n=2;
Oryza sativa|Rep: Os03g0645200 protein - Oryza sativa
subsp. japonica (Rice), partial (25%)
Length = 398
Score = 232 bits (117), Expect = 2e-60
Identities = 117/117 (100%)
Strand = Plus / Minus
Query: 445 gatgcgactccttcagattatgtctcaatgatagtcacagattatggcatggttcctccc 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gatgcgactccttcagattatgtctcaatgatagtcacagattatggcatggttcctccc 339
Query: 505 acaagtgtgcctgtaattgtaagagaatatgggaaagaacaggtctggatataaaat 561
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 acaagtgtgcctgtaattgtaagagaatatgggaaagaacaggtctggatataaaat 282
>gnl|LJGI|TC58396 similar to UniRef100_A7PAL4 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 1029
Score = 113 bits (57), Expect = 1e-24
Identities = 192/237 (81%)
Strand = Plus / Plus
Query: 118 tgtacatacactcatataaatgctgtttcctacataatgcatgaagttactagagttttt 177
||||||||||||||||||||||||||||| || || ||||| || || || | ||||||
Sbjct: 106 tgtacatacactcatataaatgctgtttcttatatcatgcacgaggtcacaaaggttttt 165
Query: 178 ctgggtgcttcatcagtcttgtctaacggaactgtatattcaagagttgggactgcatgt 237
||||| ||||| | | ||| || ||||||||||||||||| ||||||||||| |||
Sbjct: 166 ctgggagcttctgccattctgtgcaatggaactgtatattcaagggttgggactgcttgt 225
Query: 238 gttgcaatggttgctcatgcattccgtgtacctgtcatagtttgttgtgaggcctataaa 297
||||| ||||| ||||||||||| ||| ||||| || | |||||||| | |||||
Sbjct: 226 gttgctatggtggctcatgcatttaatgttcctgtattaatctgttgtgaaacttataag 285
Query: 298 tttcatgagagagtacagctggattcaatatgctcgaatgaactcggtgatccagat 354
|||||||| || || || || ||||||||||| || |||||||| ||| | ||||||
Sbjct: 286 tttcatgaaagggtgcaacttgattcaatatgttccaatgaactaggtaacccagat 342