Miyakogusa Predicted Gene

Lj0g3v0264339.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0264339.1 Non Chatacterized Hit- tr|E0CQN7|E0CQN7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.63,5e-19,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PGR3 (PROTON GRADIENT REGULATION 3),NU,CUFF.17427.1
         (691 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP063629 weakly similar to UniRef100_A7PEX7 Cluster: Ch...   862   0.0  

>gnl|LJGI|BP063629 weakly similar to UniRef100_A7PEX7 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (18%)
          Length = 525

 Score =  862 bits (435), Expect = 0.0
 Identities = 437/438 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagggaacatgtatttctcttctcaaaagttgcaaatccatgtgcgagttgaagcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  atgaagggaacatgtatttctcttctcaaaagttgcaaatccatgtgcgagttgaagcaa 147

                                                                       
Query: 61  attcaggccctcatattctgttcaggcctgcaacaagacagggacaccctcaacaagctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 attcaggccctcatattctgttcaggcctgcaacaagacagggacaccctcaacaagctc 207

                                                                       
Query: 121 atggccatttctacggactcctccattggagactttcactatgcacttagaatcttcgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 atggccatttctacggactcctccattggagactttcactatgcacttagaatcttcgac 267

                                                                       
Query: 181 catatccaacagccatctttattcaactacaatgtcatgatcaaagcctttgcaaaaaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 catatccaacagccatctttattcaactacaatgtcatgatcaaagcctttgcaaaaaag 327

                                                                       
Query: 241 ggtagtttcagaagagccatttctctgttccagcaactgagggaagatggggtgtggcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ggtagtttcagaagagccatttctctgttccagcaactgagggaagatggggtgtggcct 387

                                                                       
Query: 301 gataattacacctacccttatgtcttgaaggccattggctgcctgggagatgttggtcaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gataattacacctacccttatgtcttgaaggccattggctgcctgggagatgttggtcaa 447

                                                                       
Query: 361 gggaggaaggttcatgcttttgtgatcaagagtggccttgagtttgatgcttatgtttgc 420
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 448 gggaggaaggttcatgcttttgtgatcaagagtggncttgagtttgatgcttatgtttgc 507

                             
Query: 421 aactcgctgatggacatg 438
           ||||||||||||||||||
Sbjct: 508 aactcgctgatggacatg 525