Miyakogusa Predicted Gene

Lj0g3v0264269.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0264269.1 CUFF.17426.1
         (230 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57360 similar to UniRef100_Q4GXE9 Cluster: Ribosomal ...   456   e-128
gnl|LJGI|TC65175                                                       62   2e-09

>gnl|LJGI|TC57360 similar to UniRef100_Q4GXE9 Cluster: Ribosomal protein L23Ae; n=1;
           Georissus sp. APV-2005|Rep: Ribosomal protein L23Ae -
           Georissus sp. APV-2005, partial (6%)
          Length = 861

 Score =  456 bits (230), Expect = e-128
 Identities = 230/230 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcaaagttctgaattgcacccattatgcactaggattttgttcctgtctacacttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 atgggcaaagttctgaattgcacccattatgcactaggattttgttcctgtctacacttg 685

                                                                       
Query: 61  ctggtttgttgttgggatgtgctatttgggatgtccaaactgacctgcaagttctggtcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ctggtttgttgttgggatgtgctatttgggatgtccaaactgacctgcaagttctggtcc 745

                                                                       
Query: 121 ctttatgaccttttttctggtttgaagtgctttttctactggtttataaggaacttggac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ctttatgaccttttttctggtttgaagtgctttttctactggtttataaggaacttggac 805

                                                             
Query: 181 ttcttctcttgtggtaaatttctcattatgctgctgctgctatgttgatc 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ttcttctcttgtggtaaatttctcattatgctgctgctgctatgttgatc 855


>gnl|LJGI|TC65175 
          Length = 752

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 200 ttctcattatgctgctgctgctatgttgatc 230
           |||||||||||||||||||||||||||||||
Sbjct: 1   ttctcattatgctgctgctgctatgttgatc 31