Miyakogusa Predicted Gene
- Lj0g3v0263879.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0263879.1 Non Chatacterized Hit- tr|I3T3F4|I3T3F4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,54.33,0,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; PPR: pentatricopeptide
,CUFF.17391.1
(1482 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS336552 weakly similar to UniRef100_A7PJ25 Cluster: Ch... 708 0.0
gnl|LJGI|AV410889 similar to UniRef100_A7PJ25 Cluster: Chromosom... 692 0.0
gnl|LJGI|TC78710 weakly similar to UniRef100_A7PJ25 Cluster: Chr... 535 e-151
gnl|LJGI|AV770022 466 e-130
gnl|LJGI|AV767794 similar to UniRef100_A7FUA5 Cluster: RelA/SpoT... 406 e-112
gnl|LJGI|AV421795 weakly similar to UniRef100_A7R2K2 Cluster: Ch... 264 1e-69
gnl|LJGI|TC72511 weakly similar to UniRef100_A7PJ25 Cluster: Chr... 66 7e-10
>gnl|LJGI|FS336552 weakly similar to UniRef100_A7PJ25 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 833
Score = 708 bits (357), Expect = 0.0
Identities = 669/773 (86%)
Strand = Plus / Plus
Query: 2 tgatgaaccgcattgcatcaaaattgaaccttaacaacacccttcgtctcttctcttctt 61
||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 tgatgaatcgcattgcatcgaaatggaaccttaacaacacccttcgtctcttctcttctt 120
Query: 62 attcttctccaatcgataccctcttcttacgaatttccagaaccggagaccctgccatcc 121
||||||||| | |||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 cttcttctccgaccgattccctcttcttacgaatttccaggtccggagaccctgccatct 180
Query: 122 ccgttactcctctcctcaatcaatgggttcaagagggcagacccatcaaccatggcgacc 181
|| | |||||||||||||||||||||||| |||||||||||||||||||||||| || |
Sbjct: 181 ccatcactcctctcctcaatcaatgggttgaagagggcagacccatcaaccatgctgagc 240
Query: 182 ttcaattcttcatcaagcaactcagatccttccgtcgcttcaaacatgcccttcagatat 241
| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 241 tccaattcttcatcaagcaactcagagctcatcgtcgcttcaatcatgcccttcagatat 300
Query: 242 cggaatggatgagcgatgaaaggaaccattatttacactctggagacattgctatacgtc 301
| |||||||||||| |||||||||||| | |||| |||| | |||||||||| ||||
Sbjct: 301 cagaatggatgagcaatgaaaggaaccttcatttcttatctgcaaacattgctattcgtc 360
Query: 302 tcgacttgatatctaaagtccgcggcctagaggaagcagagaaatatttttggagcattc 361
||||||||||| |||||||||| |||||| ||||||||||||||||||| |||||| ||
Sbjct: 361 tcgacttgatagctaaagtccggggcctatcggaagcagagaaatattttaggagcactc 420
Query: 362 cggagacttcaagagatttcaaggtctatggtgcttttttgaattgccatgcgcaacaca 421
|| | |||| |||||||| ||||||||||||||| ||||||||||| |||| ||||||
Sbjct: 421 cgtactcttcgagagattttaaggtctatggtgctcttttgaattgctatgctcaacacg 480
Query: 422 gctccgtggagaaggcggaggctatcatgcagagaattaaagaatacccctccatgccag 481
|||| |||||||||||||| || || ||||||| ||||||||||||| |||||| || |
Sbjct: 481 gctcggtggagaaggcggaagccattatgcagaaaattaaagaatactcctccaagcggg 540
Query: 482 caaagggcttagcattgagttataatgttatgatgggactctatgctcggacaggtcaat 541
|| || | | ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 541 taacatgccttgtattgagttataatgttatgttgaaactctatgctcggacaggtcaat 600
Query: 542 atgagaaattgcatgatttgatgcgagaaatgaaagagaagaacttatgcaaccatgtca 601
| |||||| | ||||||||||||||||||||| ||||||| ||||||| || |||||
Sbjct: 601 ctaagaaatcgtatgatttgatgcgagaaatgatagagaaggacttatgggactgtgtca 660
Query: 602 cacttaatacttggctgagtgcttgtgtgacaatcaatgatatagatgagatggagaaga 661
|| ||||||| |||||||| || |||| || ||||||||| ||||||||||||||
Sbjct: 661 cagttaatacctggctgagggcccttgtggaaagtaatgatataaatgagatggagaagt 720
Query: 662 tactggcgcagatggaagttgatccccgggcaactgtggactggtttacatactgtactg 721
|||| ||||||| |||||||||||||| | ||||||||| ||||| |||||||||||||
Sbjct: 721 tactagcgcagacggaagttgatcccctgataactgtggattggttaacatactgtactg 780
Query: 722 cagcagatggttatactagagccgaccaatttgagaagtcattggcaatgttg 774
||||||||||||||| || ||| || |||||| ||||||||||||||||||
Sbjct: 781 cagcagatggttatattaaagcttgccgatttgataagtcattggcaatgttg 833
>gnl|LJGI|AV410889 similar to UniRef100_A7PJ25 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 436
Score = 692 bits (349), Expect = 0.0
Identities = 349/349 (100%)
Strand = Plus / Plus
Query: 1 atgatgaaccgcattgcatcaaaattgaaccttaacaacacccttcgtctcttctcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atgatgaaccgcattgcatcaaaattgaaccttaacaacacccttcgtctcttctcttct 147
Query: 61 tattcttctccaatcgataccctcttcttacgaatttccagaaccggagaccctgccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tattcttctccaatcgataccctcttcttacgaatttccagaaccggagaccctgccatc 207
Query: 121 cccgttactcctctcctcaatcaatgggttcaagagggcagacccatcaaccatggcgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 cccgttactcctctcctcaatcaatgggttcaagagggcagacccatcaaccatggcgac 267
Query: 181 cttcaattcttcatcaagcaactcagatccttccgtcgcttcaaacatgcccttcagata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cttcaattcttcatcaagcaactcagatccttccgtcgcttcaaacatgcccttcagata 327
Query: 241 tcggaatggatgagcgatgaaaggaaccattatttacactctggagacattgctatacgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tcggaatggatgagcgatgaaaggaaccattatttacactctggagacattgctatacgt 387
Query: 301 ctcgacttgatatctaaagtccgcggcctagaggaagcagagaaatatt 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctcgacttgatatctaaagtccgcggcctagaggaagcagagaaatatt 436
>gnl|LJGI|TC78710 weakly similar to UniRef100_A7PJ25 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 723
Score = 535 bits (270), Expect = e-151
Identities = 456/518 (88%)
Strand = Plus / Plus
Query: 913 aattcaagttacataagcatgttaactgcattattacggttgaatgatgttgatggagct 972
|||||||||||||| |||||||||||||||| | | ||||||| || |||||||||||
Sbjct: 17 aattcaagttacatctgcatgttaactgcattgtcaaggttgaacgacattgatggagct 76
Query: 973 gagaggattgtggaggaatgggaatctggaaatacatgcaaggatataagaattccaaat 1032
||| ||||| ||||||| ||||||||||||||| || || | || | ||||||||||||
Sbjct: 77 gaggggattctggaggagtgggaatctggaaattcacgccatgacctcagaattccaaat 136
Query: 1033 ctgttggtccgtatgtattgtgagaatggcctgttggaaaaggctgaagcatgtattgcg 1092
|| |||| || | |||||| |||||||||||||||||||||||||||||| | ||| |
Sbjct: 137 gtgatggtgagtgtttattgtaagaatggcctgttggaaaaggctgaagcatatgttggg 196
Query: 1093 aggcttttagaaagagacattaaatttgatggaagtatatgggatcgtttggctagtggc 1152
||||||||||||||||||| |||||| ||||||||| | ||||||||||||||| |||||
Sbjct: 197 aggcttttagaaagagacagtaaattagatggaagtgtgtgggatcgtttggctcgtggc 256
Query: 1153 tattgcaggtgcaaagatatggataaagcagttgaaacattgaagaaagcaatattggct 1212
|||| || ||||||||||||||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 257 tattctagctgcaaagatatggataaagcacttgaaacaatgaagaaagcaattttggct 316
Query: 1213 ggtcgaccaggatggaaggcttacccatttactttagctcaatgtattgagcatttgaaa 1272
|||||||||||||||||||||||||| |||||||| ||| ||||||||||| |||||
Sbjct: 317 ggtcgaccaggatggaaggcttacccttttacttttgctgcctgtattgagcacgtgaaa 376
Query: 1273 gagaagagagattcagaattggcatcggagattcttaggttatgtggggaacgaggttat 1332
|||||| ||||||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 377 gagaagggagattcagaattggcatcagagattcttaggatatgtggggaacgagattat 436
Query: 1333 ttcactgctgccacacatgatagattactaagttatgtgcatggtgaaatcccagaagca 1392
||||||||| |||| ||||||| ||||||||| ||| ||||||| |||||||||||| ||
Sbjct: 437 ttcactgctaccacccatgataaattactaagctatatgcatggggaaatcccagaaaca 496
Query: 1393 aatgccttagatctgatagatgaagataatcgtctgag 1430
||||||||||||||||| | | |||| ||||||||||
Sbjct: 497 aatgccttagatctgattaaaggagattatcgtctgag 534
>gnl|LJGI|AV770022
Length = 401
Score = 466 bits (235), Expect = e-130
Identities = 235/235 (100%)
Strand = Plus / Minus
Query: 1248 agctcaatgtattgagcatttgaaagagaagagagattcagaattggcatcggagattct 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 agctcaatgtattgagcatttgaaagagaagagagattcagaattggcatcggagattct 342
Query: 1308 taggttatgtggggaacgaggttatttcactgctgccacacatgatagattactaagtta 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 taggttatgtggggaacgaggttatttcactgctgccacacatgatagattactaagtta 282
Query: 1368 tgtgcatggtgaaatcccagaagcaaatgccttagatctgatagatgaagataatcgtct 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgtgcatggtgaaatcccagaagcaaatgccttagatctgatagatgaagataatcgtct 222
Query: 1428 gagggtggtgtatgttgatgttccagatggagagaagcagcacgaaaagtagctc 1482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gagggtggtgtatgttgatgttccagatggagagaagcagcacgaaaagtagctc 167
>gnl|LJGI|AV767794 similar to UniRef100_A7FUA5 Cluster: RelA/SpoT domain protein; n=2;
Clostridium botulinum A|Rep: RelA/SpoT domain protein -
Clostridium botulinum (strain ATCC 19397 / Type A),
partial (6%)
Length = 408
Score = 406 bits (205), Expect = e-112
Identities = 298/328 (90%), Gaps = 2/328 (0%)
Strand = Plus / Minus
Query: 1151 gctattgcaggtgcaaagatatggataaagcagttgaaacattgaagaaagcaatattgg 1210
||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||
Sbjct: 408 gctattgcaggtgcaaagatatggataaatcagttgaaacgttgaagaaagcaatgttgg 349
Query: 1211 ctggtcgaccaggatggaaggcttacccatttactttagctcaatgtattgagcatttga 1270
||||||||||||||||||||| | || |||||||| ||| ||||||||||||| | |
Sbjct: 348 ctggtcgaccaggatggaaggtgcaaccgtttacttttgcttcatgtattgagcatgtaa 289
Query: 1271 aagagaagagagattcagaattggcatcggagattcttaggttatgtggggaacgaggtt 1330
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 288 aagagaagagagattcagaattggcatcggagattcttaggatatgcggggaacgaggtt 229
Query: 1331 atttcactgctgccacacatgatagattactaagttatgtgcatggtgaaatcccagaag 1390
|||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 228 attttactgctgccacccatgatagattactaagttatatgcatggtgaaatcccagaag 169
Query: 1391 caaatgccttagatctgatagatgaagataatcgtctgagggtggtgtatgttgatgttc 1450
|||||||||| |||||||| | |||||| |||||||||||| || | | |||| ||||
Sbjct: 168 taaatgccttaaatctgataaaagaagattatcgtctgaggggggag--ttttgaagttc 111
Query: 1451 cagatggagagaagcagcacgaaaagta 1478
||||||||||||||||||| ||||||||
Sbjct: 110 cagatggagagaagcagcatgaaaagta 83
>gnl|LJGI|AV421795 weakly similar to UniRef100_A7R2K2 Cluster: Chromosome chr10
scaffold_433, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_433, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 267
Score = 264 bits (133), Expect = 1e-69
Identities = 220/249 (88%)
Strand = Plus / Plus
Query: 18 atcaaaattgaaccttaacaacacccttcgtctcttctcttcttattcttctccaatcga 77
|||||||| |||||||| |||||| ||||||||||||||||||| |||||||||| |||
Sbjct: 4 atcaaaatggaaccttaccaacacacttcgtctcttctcttcttcatcttctccaaccga 63
Query: 78 taccctcttcttacgaatttccagaaccggagaccctgccatccccgttactcctctcct 137
| ||||||||||||||||||||||| |||| |||| |||||||||| | |||||||||||
Sbjct: 64 ttccctcttcttacgaatttccagatccggcgaccgtgccatccccatgactcctctcct 123
Query: 138 caatcaatgggttcaagagggcagacccatcaaccatggcgaccttcaattcttcatcaa 197
|||||||||| |||||||||||| || ||||||| | || |||||||| ||||||||
Sbjct: 124 caatcaatggcttcaagagggcaaactcatcaactactctgagcttcaatttttcatcaa 183
Query: 198 gcaactcagatccttccgtcgcttcaaacatgcccttcagatatcggaatggatgagcga 257
|||||||||| ||| ||||||||||| ||||| ||||||||||| |||||||||||| |
Sbjct: 184 gcaactcagagcctctcgtcgcttcaatcatgctcttcagatatcagaatggatgagcaa 243
Query: 258 tgaaaggaa 266
|||||||||
Sbjct: 244 tgaaaggaa 252
>gnl|LJGI|TC72511 weakly similar to UniRef100_A7PJ25 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (41%)
Length = 1907
Score = 65.9 bits (33), Expect = 7e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 651 gatggagaagatactggcgcagatggaagttgatccccgggcaactgtggactggtttac 710
|||||||||| |||| ||||||||||| |||||| ||| ||||||||||||| |||
Sbjct: 768 gatggagaagctactaatgcagatggaagctgatcctatggcgactgtggactggtatac 827
Query: 711 atactgtactgcagcagatggttat 735
||||| ||| |||||| ||||||||
Sbjct: 828 atactctacagcagcaaatggttat 852
Score = 60.0 bits (30), Expect = 4e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 211 ttccgtcgcttcaaacatgcccttcagatatcggaatggatgagcgatgaaaggaaccat 270
||||| || |||| ||||||||||||| |||| || ||||||||| ||||||||||| ||
Sbjct: 337 ttccgccgattcacacatgcccttcaggtatcagagtggatgagcaatgaaaggaactat 396
Query: 271 tattta 276
|||||
Sbjct: 397 gattta 402
Score = 58.0 bits (29), Expect = 2e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1168 gatatggataaagcagttgaaacattgaagaaagcaatattggctggtcgaccaggatgg 1227
|||||||| ||||||||| ||||| ||||||||||||| ||||| ||||||||| |||
Sbjct: 1285 gatatggaaaaagcagttcaaacaatgaagaaagcaatcttggcaaatcgaccaggctgg 1344
Query: 1228 a 1228
|
Sbjct: 1345 a 1345
Score = 56.0 bits (28), Expect = 6e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 523 tatgctcggacaggtcaatatgagaaattgcatgatttgatgcgagaaatgaaagagaag 582
||||||| || |||| |||||||||||||| || ||||||| |||||||||||||||
Sbjct: 640 tatgctcagaaaggtaaatatgagaaattggataggttgatgcaagaaatgaaagagaat 699
Query: 583 aacttatgcaac 594
|||| ||||||
Sbjct: 700 gacttgtgcaac 711