Miyakogusa Predicted Gene
- Lj0g3v0263769.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0263769.1 Non Chatacterized Hit- tr|I1PH32|I1PH32_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,42.48,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_18621_length_317_cov_302.246063.path1.1
(339 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71229 similar to UniRef100_A4PU47 Cluster: Ankyrin; n... 664 0.0
gnl|LJGI|GO032251 similar to UniRef100_A4PU47 Cluster: Ankyrin; ... 287 2e-77
gnl|LJGI|TC63323 similar to UniRef100_A4PU47 Cluster: Ankyrin; n... 100 1e-20
gnl|LJGI|AI967511 similar to UniRef100_A0T2V0 Cluster: Beta-acti... 54 6e-07
>gnl|LJGI|TC71229 similar to UniRef100_A4PU47 Cluster: Ankyrin; n=1; Medicago
truncatula|Rep: Ankyrin - Medicago truncatula (Barrel
medic), partial (60%)
Length = 1400
Score = 664 bits (335), Expect = 0.0
Identities = 338/339 (99%)
Strand = Plus / Plus
Query: 1 atggcattcattttcaatggtcaagttgtcatcgatacatcactacctttcagaagtaac 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 410 atggcattcattttcaatggtcaagttgtcatcgatacatcgctacctttcagaagtaac 469
Query: 61 aattatagcaagattttgactgttagtcctatagctgcaccagcatcaaagagagttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aattatagcaagattttgactgttagtcctatagctgcaccagcatcaaagagagttcaa 529
Query: 121 ttttccgttaagggtgtcaacatgatacgccctgccacgaggttaatgtgtgctttagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttttccgttaagggtgtcaacatgatacgccctgccacgaggttaatgtgtgctttagaa 589
Query: 181 gggaaatatctggtctgtgaagatgctcatgagtcgatggatcaatactccgaggagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gggaaatatctggtctgtgaagatgctcatgagtcgatggatcaatactccgaggagctt 649
Query: 241 gatggacttcattgcatccagttttcttgtgctgtccctgtaacaaatggaagaggattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gatggacttcattgcatccagttttcttgtgctgtccctgtaacaaatggaagaggattt 709
Query: 301 attgagattgaggaccagggtttgagtagcagctttttt 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 710 attgagattgaggaccagggtttgagtagcagctttttt 748
>gnl|LJGI|GO032251 similar to UniRef100_A4PU47 Cluster: Ankyrin; n=1; Medicago
truncatula|Rep: Ankyrin - Medicago truncatula (Barrel
medic), partial (32%)
Length = 740
Score = 287 bits (145), Expect = 2e-77
Identities = 283/329 (86%)
Strand = Plus / Plus
Query: 11 ttttcaatggtcaagttgtcatcgatacatcactacctttcagaagtaacaattatagca 70
||||||||||||| ||||| || |||||||| |||||||||||||| || |||||||||
Sbjct: 139 ttttcaatggtcaggttgttatagatacatccttacctttcagaagtcacgattatagca 198
Query: 71 agattttgactgttagtcctatagctgcaccagcatcaaagagagttcaattttccgtta 130
||||||| | ||||||||| || |||| ||||||||| |||| | ||||||||| ||||
Sbjct: 199 agattttaagtgttagtccaattgctgtaccagcatcgaagacatctcaattttctgtta 258
Query: 131 agggtgtcaacatgatacgccctgccacgaggttaatgtgtgctttagaagggaaatatc 190
||||| ||||| ||| ||||| ||||| |||||| |||||||| |||||||| | ||||
Sbjct: 259 agggtatcaacctgaatcgccccgccactaggttactgtgtgctatagaaggggattatc 318
Query: 191 tggtctgtgaagatgctcatgagtcgatggatcaatactccgaggagcttgatggacttc 250
|||| |||||||||| | ||||||| | |||||| ||||| |||| ||||||| ||||
Sbjct: 319 tggtatgtgaagatgttaatgagtctacagatcaacactccaaggatcttgatgagcttc 378
Query: 251 attgcatccagttttcttgtgctgtccctgtaacaaatggaagaggatttattgagattg 310
| |||||||||||||| ||| |||||||||| | |||||||||||||||||||||||||
Sbjct: 379 agtgcatccagttttcatgttctgtccctgtgatgaatggaagaggatttattgagattg 438
Query: 311 aggaccagggtttgagtagcagctttttt 339
|||||||||| ||||| ||||||||||||
Sbjct: 439 aggaccaggggttgagcagcagctttttt 467
>gnl|LJGI|TC63323 similar to UniRef100_A4PU47 Cluster: Ankyrin; n=1; Medicago
truncatula|Rep: Ankyrin - Medicago truncatula (Barrel
medic), partial (4%)
Length = 729
Score = 99.6 bits (50), Expect = 1e-20
Identities = 73/80 (91%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 160 aggttaatgtgtgctttagaagggaa---atatctggtctgtgaagatgctcatgagtcg 216
|||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||
Sbjct: 228 aggttaatgtgtgctttagaagggaactaatatctggtatatgaagatgctcatgagtca 287
Query: 217 atggatcaatactccgagga 236
||||||||||||||| ||||
Sbjct: 288 atggatcaatactccaagga 307
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 278 ctgtaacaaatggaagaggatttattgag 306
|||| ||||||||||||||||||||||||
Sbjct: 309 ctgtgacaaatggaagaggatttattgag 337
>gnl|LJGI|AI967511 similar to UniRef100_A0T2V0 Cluster: Beta-actin; n=1; Penaeus
monodon|Rep: Beta-actin - Penaeus monodon (Penoeid
shrimp), partial (17%)
Length = 361
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 278 ctgtaacaaatggaagaggatttattgagat 308
|||| ||||||||||||||||||||||||||
Sbjct: 15 ctgtgacaaatggaagaggatttattgagat 45