Miyakogusa Predicted Gene
- Lj0g3v0263729.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0263729.1 tr|B6SXM5|B6SXM5_MAIZE ATP binding protein OS=Zea
mays PE=2 SV=1,58.33,3e-19, ,CUFF.17385.1
(261 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58524 similar to UniRef100_Q6WJ05 Cluster: Central mo... 331 1e-90
gnl|LJGI|TC63151 similar to UniRef100_A7NW24 Cluster: Chromosome... 307 2e-83
gnl|LJGI|TC80267 homologue to UniRef100_Q6WJ05 Cluster: Central ... 232 8e-61
gnl|LJGI|TC69817 weakly similar to UniRef100_A7P735 Cluster: Chr... 111 2e-24
gnl|LJGI|DC596186 64 4e-10
gnl|LJGI|FS337921 weakly similar to UniRef100_A7P735 Cluster: Ch... 54 4e-07
>gnl|LJGI|TC58524 similar to UniRef100_Q6WJ05 Cluster: Central motor kinesin 1; n=1;
Gossypium hirsutum|Rep: Central motor kinesin 1 -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (17%)
Length = 856
Score = 331 bits (167), Expect = 1e-90
Identities = 209/223 (93%)
Strand = Plus / Plus
Query: 3 gggttatggagcgcaatccgctgaagagaagcagaggcttttgaagttgatgagaaacct 62
||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gggttatggagcgcagtctgccgaagagaagcagaggcttttgaagttgatgagaaacct 518
Query: 63 caatttcaatggggaatctggttcagagacatatacgcccaccacccgaactttaggtgg 122
|||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||
Sbjct: 519 caatttcaatggggaatctggttcggagccatatacgcccaccacccaaactttaggtgg 578
Query: 123 agtggctgcatcagatgggctttactctccggagttcagaggggattttggagctgggct 182
|||||||| |||||||||| |||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 579 agtggctggatcagatgggttttattctcctgagttcaggggggattttggagccgggct 638
Query: 183 tttggatcttcatgctatggatgttatagagcttttgtctgag 225
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 639 tttggatcttcatgctatggatgatacagagcttttgtctgag 681
>gnl|LJGI|TC63151 similar to UniRef100_A7NW24 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 848
Score = 307 bits (155), Expect = 2e-83
Identities = 206/223 (92%)
Strand = Plus / Plus
Query: 3 gggttatggagcgcaatccgctgaagagaagcagaggcttttgaagttgatgagaaacct 62
|||||||||||| || || |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 484 gggttatggagcacagtctgctgaagagaagcagaggcttttgaagttgatgagaaatct 543
Query: 63 caatttcaatggggaatctggttcagagacatatacgcccaccacccgaactttaggtgg 122
||||||||||||||| |||||||| ||| | ||||||||||| ||| ||||||||||||
Sbjct: 544 caatttcaatggggagtctggttcggagccgtatacgcccactgcccaaactttaggtgg 603
Query: 123 agtggctgcatcagatgggctttactctccggagttcagaggggattttggagctgggct 182
|||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct: 604 agtggctgcatcggatgggttttattctccggagttcaggggggattttggagctgggct 663
Query: 183 tttggatcttcatgctatggatgttatagagcttttgtctgag 225
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 664 tttggatcttcatgctatggatgatacagagcttttgtctgag 706
>gnl|LJGI|TC80267 homologue to UniRef100_Q6WJ05 Cluster: Central motor kinesin 1;
n=1; Gossypium hirsutum|Rep: Central motor kinesin 1 -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (11%)
Length = 740
Score = 232 bits (117), Expect = 8e-61
Identities = 147/157 (93%)
Strand = Plus / Plus
Query: 3 gggttatggagcgcaatccgctgaagagaagcagaggcttttgaagttgatgagaaacct 62
||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gggttatggagcgcagtctgccgaagagaagcagaggcttttgaagttgatgagaaacct 643
Query: 63 caatttcaatggggaatctggttcagagacatatacgcccaccacccgaactttaggtgg 122
|||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||
Sbjct: 644 caatttcaatggggaatctggttcggagccatatacgcccaccacccaaactttaggtgg 703
Query: 123 agtggctgcatcagatgggctttactctccggagttc 159
|||||||| |||||||||| |||| ||||| ||||||
Sbjct: 704 agtggctggatcagatgggttttattctcctgagttc 740
>gnl|LJGI|TC69817 weakly similar to UniRef100_A7P735 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 999
Score = 111 bits (56), Expect = 2e-24
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 202 gatgttatagagcttttgtctgaggacttgggagcaaagctccaactgtggaagtaaggt 261
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 gatgttatagagcttttgtctgaggacttgggagcaaagccccaactgtggaagtaaggt 60
>gnl|LJGI|DC596186
Length = 308
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 217 ttgtctgaggacttgggagcaaagctccaactgtggaagt 256
|||||| ||||||| |||||||||||||||||||||||||
Sbjct: 9 ttgtcttaggacttaggagcaaagctccaactgtggaagt 48
>gnl|LJGI|FS337921 weakly similar to UniRef100_A7P735 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (3%)
Length = 711
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 226 gacttgggagcaaagctccaactgtggaagt 256
||||| |||||||||||||||||||||||||
Sbjct: 462 gacttaggagcaaagctccaactgtggaagt 492