Miyakogusa Predicted Gene
- Lj0g3v0263719.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0263719.1 Non Chatacterized Hit- tr|I3T0Y8|I3T0Y8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.41,0,coiled-coil,NULL; TRANSCRIPTION FACTOR X1-LIKE,NULL;
RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED,NULL,CUFF.17380.1
(1227 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO026970 similar to UniRef100_A7NYZ4 Cluster: Chromosom... 1001 0.0
gnl|LJGI|FS318213 weakly similar to UniRef100_A7PIT9 Cluster: Ch... 143 3e-33
gnl|LJGI|BP040430 weakly similar to UniRef100_Q2QNA8 Cluster: XH... 117 2e-25
gnl|LJGI|GO022130 86 6e-16
gnl|LJGI|BP041010 similar to UniRef100_A7NYZ4 Cluster: Chromosom... 78 1e-13
gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 56 5e-07
>gnl|LJGI|GO026970 similar to UniRef100_A7NYZ4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (13%)
Length = 850
Score = 1001 bits (505), Expect = 0.0
Identities = 511/513 (99%)
Strand = Plus / Minus
Query: 715 agaatgattgagggaattgcaggaaggtcaagtcgttgtgccaatattggtgtaaagaga 774
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 agaatgattgagggaattgcaggaaggtcaagtcgttgtgccaatattggtgtaaagagg 791
Query: 775 atgggggaactggacaatgggccatttcttaaagctttgcgtgcgaagcaaagaaattat 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 atgggggaactggacaatgggccatttcttaaagctttgcgtgcgaagcaaagaaattat 731
Query: 835 acgcagagagctgcaacattgtgttctgtgtgggaaaataatctgaaggacccccattgg 894
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 acgcagagagctgtaacattgtgttctgtgtgggaaaataatctgaaggacccccattgg 671
Query: 895 tatccattcaaaataattacaattggtggggaatcaaaggaaattatagatgaagaagat 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tatccattcaaaataattacaattggtggggaatcaaaggaaattatagatgaagaagat 611
Query: 955 gaaaagctgaaacgactgaaaagggacatgggtgctgggccataccaagcggtggtgaaa 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gaaaagctgaaacgactgaaaagggacatgggtgctgggccataccaagcggtggtgaaa 551
Query: 1015 gctttgacagagatgaatgagtacaatcctagtgggagatctgtggtctcagagctatgg 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gctttgacagagatgaatgagtacaatcctagtgggagatctgtggtctcagagctatgg 491
Query: 1075 aatcatggagagaacaggagagcaactttggaagaaggggttgaatttctatttggacat 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aatcatggagagaacaggagagcaactttggaagaaggggttgaatttctatttggacat 431
Query: 1135 tggaaaacaaaaaagcagaaaacacatcaaatggggacagatgatgatagtgaggatgct 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tggaaaacaaaaaagcagaaaacacatcaaatggggacagatgatgatagtgaggatgct 371
Query: 1195 tatcaaagaaaaaatggtagtgaggccggatag 1227
|||||||||||||||||||||||||||||||||
Sbjct: 370 tatcaaagaaaaaatggtagtgaggccggatag 338
>gnl|LJGI|FS318213 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 778
Score = 143 bits (72), Expect = 3e-33
Identities = 198/240 (82%)
Strand = Plus / Plus
Query: 550 ttagaagtcatgaagaacatggaagatgaatctctgaagacggtaggtaatttacaaaca 609
||||| |||||| || ||||||||| ||||| |||||||| ||| | | ||||||| | |
Sbjct: 511 ttagatgtcatggagcacatggaaggtgaatttctgaagatggtggctgatttacacata 570
Query: 610 aatttaatggaaaaggaacagttacttcaggagttacaagattattgccaatcagtgatc 669
||| || ||||||||||| | |||||| | ||| |||| ||| ||||| || |||
Sbjct: 571 aatgtagcggaaaaggaacgggcacttcaagccttagaagaatatagccaagcactgaca 630
Query: 670 actaaagagcgtcagagcaatgatgagcttcagaaagctcgaaaaagaatgattgaggga 729
|||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 631 gttaaagagcgtgagagcaacgatgagcttcagaaaactcgaaaaagaatgattgagggc 690
Query: 730 attgcaggaaggtcaagtcgttgtgccaatattggtgtaaagagaatgggggaactggac 789
||||||||||| | |||||| ||||||| |||| ||| |||||||||||| || |||||
Sbjct: 691 attgcaggaagacctagtcgtggtgccaacattgttgtgaagagaatggggcaagtggac 750
>gnl|LJGI|BP040430 weakly similar to UniRef100_Q2QNA8 Cluster: XH domain containing
protein, expressed; n=1; Oryza sativa Japonica Group|Rep:
XH domain containing protein, expressed - Oryza sativa
subsp. japonica (Rice), partial (16%)
Length = 501
Score = 117 bits (59), Expect = 2e-25
Identities = 218/271 (80%)
Strand = Plus / Minus
Query: 854 tgtgttctgtgtgggaaaataatctgaaggacccccattggtatccattcaaaataatta 913
|||||||| ||||||||| ||||| ||||||||||| ||| |||| ||||||| || |
Sbjct: 471 tgtgttctaagtgggaaaagaatctcaaggacccccaatggaatcctttcaaaaccatca 412
Query: 914 caattggtggggaatcaaaggaaattatagatgaagaagatgaaaagctgaaacgactga 973
| | | |||||| || ||||||| || ||||| || |||||||||||| |||||||||
Sbjct: 411 ccgtccgcggggaaacacaggaaatcattgatgaggatgatgaaaagctggaacgactga 352
Query: 974 aaagggacatgggtgctgggccataccaagcggtggtgaaagctttgacagagatgaatg 1033
|| ||| |||||| |||| ||||| |||| ||||| |||||||| ||||||||| |
Sbjct: 351 gaaaggatgtgggtgttggggcatacaaagcagtggtagcagctttgaaagagatgaagg 292
Query: 1034 agtacaatcctagtgggagatctgtggtctcagagctatggaatcatggagagaacagga 1093
| ||| || ||||||||||| || |||||||||||||||||||| || ||||
Sbjct: 291 aataccatgctagtgggagagttgcagtctcagagctatggaatcacaccatgagaagga 232
Query: 1094 gagcaactttggaagaaggggttgaatttct 1124
|||| |||||||||||||| ||||||||||
Sbjct: 231 gagccactttggaagaaggaattgaatttct 201
>gnl|LJGI|GO022130
Length = 774
Score = 85.7 bits (43), Expect = 6e-16
Identities = 60/63 (95%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 57 attacaacagttgaaagtcatgaactctggtatgagtgatgacatggaatgtattaagaa 116
|||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||
Sbjct: 702 attacaacagttgaaagtcatg-actctggtatgagtgatgacgtgg-atgtattaagaa 759
Query: 117 aga 119
|||
Sbjct: 760 aga 762
>gnl|LJGI|BP041010 similar to UniRef100_A7NYZ4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (3%)
Length = 467
Score = 77.8 bits (39), Expect = 1e-13
Identities = 87/103 (84%)
Strand = Plus / Minus
Query: 1060 gtctcagagctatggaatcatggagagaacaggagagcaactttggaagaaggggttgaa 1119
||||||||||||||||| | | ||| | |||||||| ||| |||||||||| ||||||
Sbjct: 465 gtctcagagctatggaaccgcagtgaggaaaggagagccactctggaagaaggagttgaa 406
Query: 1120 tttctatttggacattggaaaacaaaaaagcagaaaacacatc 1162
|||| |||| |||||||||| |||||||||||||| |||||
Sbjct: 405 cttctgtttgaacattggaaagtaaaaaagcagaaaatacatc 363
>gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 1275
Score = 56.0 bits (28), Expect = 5e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 665 tgatcactaaagagcgtcagagcaatgatgagcttcagaaagctcgaa 712
|||||| |||||||||| | |||||||||||||| ||| |||||||||
Sbjct: 594 tgatcattaaagagcgtaaaagcaatgatgagctacaggaagctcgaa 641