Miyakogusa Predicted Gene

Lj0g3v0263419.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0263419.1 tr|Q1LYT2|Q1LYT2_ARATH At5g06070 OS=Arabidopsis
thaliana PE=2 SV=1,51.4,9e-19,zf-C2H2_6,NULL; seg,NULL; C2H2 and C2HC
zinc fingers,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ZIN,CUFF.17363.1
         (868 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC599673 similar to UniRef100_A7PNR8 Cluster: Chromosom...   807   0.0  
gnl|LJGI|TC82169                                                       52   6e-06

>gnl|LJGI|DC599673 similar to UniRef100_A7PNR8 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 565

 Score =  807 bits (407), Expect = 0.0
 Identities = 409/410 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaacagggtcaatgttattggatgcacacaaagaggaaatactctttgagctccaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 atggaacagggtcaatgttattggatgcacacaaagaggaaatactctttgagctccaat 215

                                                                       
Query: 61  agtcttgcttcatcgtcactatcatgggaagaacaagcttttgcagaagatgctgcaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 agtcttgcttcatcgtcactatcatgggaagaacaagcttttgcagaagatgctgcaggg 275

                                                                       
Query: 121 tctcttgttggtggctgcacatggccaccaagatcatactcttgcagcttctgcaggaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tctcttgttggtggctgcacatggccaccaagatcatactcttgcagcttctgcaggaga 335

                                                                       
Query: 181 gagttcaggtcagcacaggctctaggtggccacatgaatgttcatagaaaagatagagca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gagttcaggtcagcacaggctctaggtggccacatgaatgttcatagaaaagatagagca 395

                                                                       
Query: 241 agactaaagcaaccctctagcccccaaaataatgaaattctatttcctcatgaccttgaa 300
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 396 agactaaagcaaccctctagcccccaaaataatganattctatttcctcatgaccttgaa 455

                                                                       
Query: 301 actcatcaaaccccttttagtgctccatctttgggtaattacctagcaccataccctcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 actcatcaaaccccttttagtgctccatctttgggtaattacctagcaccataccctcct 515

                                                             
Query: 361 cctgtttatgatttggcttacaagactaaccctaatcctgatcataactt 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cctgtttatgatttggcttacaagactaaccctaatcctgatcataactt 565


>gnl|LJGI|TC82169 
          Length = 368

 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 843 tctggagttaaggcttggtaattaat 868
           ||||||||||||||||||||||||||
Sbjct: 1   tctggagttaaggcttggtaattaat 26