Miyakogusa Predicted Gene
- Lj0g3v0262999.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0262999.1 Non Chatacterized Hit- tr|K3ZQP1|K3ZQP1_SETIT
Uncharacterized protein OS=Setaria italica GN=Si028921,22.4,2e-18,no
description,Tetratricopeptide-like helical; PPR_2,Pentatricopeptide
repeat; PPR,Pentatricopeptide,CUFF.17327.1
(1834 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024562 similar to UniRef100_A7QBY8 Cluster: Chromosom... 1320 0.0
gnl|LJGI|TC63700 similar to UniRef100_A7R620 Cluster: Chromosome... 896 0.0
gnl|LJGI|AV423510 weakly similar to UniRef100_A7QBY8 Cluster: Ch... 763 0.0
>gnl|LJGI|GO024562 similar to UniRef100_A7QBY8 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 684
Score = 1320 bits (666), Expect = 0.0
Identities = 678/681 (99%), Gaps = 2/681 (0%)
Strand = Plus / Plus
Query: 1 atggccatttcatgttctgcagactggtctctagcttgcacaagaactcacgtgcattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 atggccatttcatgttctgcagactggtctctagcttgcacaagaactcacgtgcattca 65
Query: 61 ttcatccccacgtgccacttcccttcctcgtacaatgtctcatcatactcctcctccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ttcatccccacgtgccacttcccttcctcgtacaatgtctcatcatactcctcctccaat 125
Query: 121 ccacggttcttcagtgcaaactcctctgcctctcccacacccatcttagaagaagcatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ccacggttcttcagtgcaaactcctctgcctctcccacacccatcttagaagaagcatca 185
Query: 181 aattccaacacccccatgctagatgtagataatgttaacaacattgctggttctcatcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 aattccaacacccccatgctagatgtagataatgttaacaacattgctggttctcatcag 245
Query: 241 caatattccaacccaggaacagagaacttgaatgagtttctatgcgggttgtttcaggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 caatattccaacccaggaacagagaacttgaatgagtttctatgcgggttgtttcaggat 305
Query: 301 ccaaaaactgaggaacttgcatttgactactaccaaagattgaaagacaggccagtgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ccaaaaactgaggaacttgcatttgactactaccaaagattgaaagacaggccagtgttt 365
Query: 361 agaccagagaaatcaactttgaagcatgtgatcaggtatttgatgagatttaagaaatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agaccagagaaatcaactttgaagcatgtgatcaggtatttgatgagatttaagaaatgg 425
Query: 421 gatttcattttatcagtttctgaagactttaagatttatcatgtgttgccggatggagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gatttcattttatcagtttctgaagactttaagatttatcatgtgttgccggatggagct 485
Query: 481 acttgctctaaattgattgagttctgcatcagacaaagaaagttcaagattgctgagacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 acttgctctaaattgattgagttctgcatcagacaaagaaagttcaagattgctgagacc 545
Query: 541 cttctgaatgcttttaaatctgatagtgaggttgctgtgtttgcatttggttctgccttg 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cttctgaatgcttttagatctgatagtgaggttgctgtgtttgcatttggttctgccttg 605
Query: 601 agaaattataacaagctacatatgtttaggagaactgttttagtctttgagaaattgaaa 660
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agaaattataacaagctac--atgtttaggagaactgttttagtctttgagaaattgaaa 663
Query: 661 tcaaatagtgttgttttggat 681
|||||||||||||||||||||
Sbjct: 664 tcaaatagtgttgttttggat 684
>gnl|LJGI|TC63700 similar to UniRef100_A7R620 Cluster: Chromosome undetermined
scaffold_1131, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1131,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (64%)
Length = 781
Score = 896 bits (452), Expect = 0.0
Identities = 452/452 (100%)
Strand = Plus / Plus
Query: 1383 gaagttggtggctaagatgaaagaaagagggtgtaaaccaaatgtgtgggtctacaattc 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaagttggtggctaagatgaaagaaagagggtgtaaaccaaatgtgtgggtctacaattc 61
Query: 1443 cttgatagacatgcatggaagggagaagaatttgaggcagcttgagaagctgtggaatga 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cttgatagacatgcatggaagggagaagaatttgaggcagcttgagaagctgtggaatga 121
Query: 1503 aatgaagagaagaaaggtagcacctgataaggtgagttacactagcatgattggagctta 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aatgaagagaagaaaggtagcacctgataaggtgagttacactagcatgattggagctta 181
Query: 1563 tagtaaggcaggtgaatttgaaacatgtacagaactttttaatgagtataggatcaatgg 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tagtaaggcaggtgaatttgaaacatgtacagaactttttaatgagtataggatcaatgg 241
Query: 1623 gggagtgattgatagagccatggcaggtataatggttggcgtgttctcgaaggttggtca 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gggagtgattgatagagccatggcaggtataatggttggcgtgttctcgaaggttggtca 301
Query: 1683 gattgatcaactggtgaagctcttacaagacatgaaaatggaaggaacaaggttggatca 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gattgatcaactggtgaagctcttacaagacatgaaaatggaaggaacaaggttggatca 361
Query: 1743 gaggctgtatcagtctgcttggaatgcctttatagaagctggtttgcaacttcaagcaaa 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaggctgtatcagtctgcttggaatgcctttatagaagctggtttgcaacttcaagcaaa 421
Query: 1803 atggttgcaagagagtttccatgtaagttaat 1834
||||||||||||||||||||||||||||||||
Sbjct: 422 atggttgcaagagagtttccatgtaagttaat 453
>gnl|LJGI|AV423510 weakly similar to UniRef100_A7QBY8 Cluster: Chromosome chr1
scaffold_75, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr1 scaffold_75, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 389
Score = 763 bits (385), Expect = 0.0
Identities = 388/389 (99%)
Strand = Plus / Plus
Query: 788 aaagatacttaggtcagatatatggggttctgtgtgagtcattaggaaagtgtggaagag 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagatacttaggtcagatatatggggttctgtgtgagtcattaggaaagtgtggaagag 60
Query: 848 tttctgaagcacttgagtacttcagagtgatgacaaagaaagggatttttgaaagttctg 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttctgaagcacttgagtacttcagagtgatgacaaagaaagggatttttgaaagttctg 120
Query: 908 tttactctaccttgatatgctcttttgcaagtttgcacaaagttggtgaggttgaggagc 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttactctaccttgatatgctcttttgcaagtttgcacaaagttggtgaggttgaggagc 180
Query: 968 ttctcagagaagctaaaagcagaacaaagataaaggatcctgaggtttatctaaagcttg 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttctcagagaagctaaaagcagaacaaagataaaggatcctgaggtttatctaaagcttg 240
Query: 1028 tgatcatgtatgttgaagaggatttattggagaagactttggaagttgttgaggcaatga 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatcatgtatgttgaagaggatttattggagaagactttggaagttgttgaggcaatga 300
Query: 1088 aggatgctgatgtcaaggtttgtgattgtatgctgtgtgctgttgttaatggcttcagca 1147
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggatgctgatgtcaaggtttctgattgtatgctgtgtgctgttgttaatggcttcagca 360
Query: 1148 aaagaagagggttttcagctgcagttaga 1176
|||||||||||||||||||||||||||||
Sbjct: 361 aaagaagagggttttcagctgcagttaga 389