Miyakogusa Predicted Gene
- Lj0g3v0262909.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0262909.1 tr|B9NCL2|B9NCL2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_586270 PE=4
SV=1,68.18,0.00000001,seg,NULL; Tic22,Tic22-like,CUFF.17318.1
(1032 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72331 similar to UniRef100_Q940R3 Cluster: AT5g62650/... 783 0.0
gnl|LJGI|TC80092 similar to UniRef100_Q940R3 Cluster: AT5g62650/... 484 e-136
>gnl|LJGI|TC72331 similar to UniRef100_Q940R3 Cluster: AT5g62650/MRG21_7; n=1;
Arabidopsis thaliana|Rep: AT5g62650/MRG21_7 -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 673
Score = 783 bits (395), Expect = 0.0
Identities = 398/399 (99%)
Strand = Plus / Plus
Query: 1 atggctctgccgtccgaacctcaccgtcgccgccgcagcaacaaccccatctcttcattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atggctctgccgtccgaacctcaccgtcgccgccgcagcaacaaccccatctcttcattc 170
Query: 61 ctcgaaaccaccgcttccaacttcgcctctctcttcaatcctcaaatcccttcttcccct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ctcgaaaccaccgcttccaacttcgcctctctcttcaatcctcaaatcccttcttccccc 230
Query: 121 ttaaccctcacgaaatcacaaccgcacccaccctcctctatctccctccctctcttcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttaaccctcacgaaatcacaaccgcacccaccctcctctatctccctccctctcttcttc 290
Query: 181 gcgccgcccctctccaccccgacggttgattcctcctccgccgccgccgcagagcactct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gcgccgcccctctccaccccgacggttgattcctcctccgccgccgccgcagagcactct 350
Query: 241 cgcccagccgccaaatcggtgagggtcacgaggctcagtacgaatgggaagggtggtggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cgcccagccgccaaatcggtgagggtcacgaggctcagtacgaatgggaagggtggtggg 410
Query: 301 cccgccttcgtggggcaggtcttcagcatgtgcgacctctctggaaccggcctcatggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cccgccttcgtggggcaggtcttcagcatgtgcgacctctctggaaccggcctcatggct 470
Query: 361 gtttccacccactttgacattcccttcatctccaaaaga 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gtttccacccactttgacattcccttcatctccaaaaga 509
>gnl|LJGI|TC80092 similar to UniRef100_Q940R3 Cluster: AT5g62650/MRG21_7; n=1;
Arabidopsis thaliana|Rep: AT5g62650/MRG21_7 - Arabidopsis
thaliana (Mouse-ear cress), partial (33%)
Length = 968
Score = 484 bits (244), Expect = e-136
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 789 tgaagaagctgttgatcaacatttccatactttaatccaaactcgtaacatgcatcggcg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagaagctgttgatcaacatttccatactttaatccaaactcgtaacatgcatcggcg 60
Query: 849 gcgggatgtggtcgatgacaacctagctgcagaagtaattgaggaaatgggagatagctt 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgggatgtggtcgatgacaacctagctgcagaagtaattgaggaaatgggagatagctt 120
Query: 909 aggagatcctccagaggttcaagaattgcttgacgaaatgggccatcctagtatacccct 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggagatcctccagaggttcaagaattgcttgacgaaatgggccatcctagtatacccct 180
Query: 969 aagtgttatatctaaggctgcagagcttcagttccattatacggttgacaaagtactcct 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagtgttatatctaaggctgcagagcttcagttccattatacggttgacaaagtactcct 240
Query: 1029 gggt 1032
||||
Sbjct: 241 gggt 244