Miyakogusa Predicted Gene
- Lj0g3v0262759.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0262759.1 tr|D2W164|D2W164_NAEGR Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_75104 PE=4
SV=1,29.25,3e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
UAA,UAA transporter; seg,NULL,CUFF.17302.1
(1182 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80496 similar to UniRef100_A7PR17 Cluster: Chromosome... 1108 0.0
gnl|LJGI|TC82050 similar to UniRef100_A7PI77 Cluster: Chromosome... 194 9e-49
gnl|LJGI|TC78630 72 9e-12
>gnl|LJGI|TC80496 similar to UniRef100_A7PR17 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 702
Score = 1108 bits (559), Expect = 0.0
Identities = 566/567 (99%), Gaps = 1/567 (0%)
Strand = Plus / Plus
Query: 1 atgacaccactttgccggcggttacccaccgccggcgccgcctcaccgttcgtccacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atgacaccactttgccggcggttacccaccgccggcgccgcctcaccgttcgtccacatc 195
Query: 61 cggcgccaacatacatcgccccctgccgcgatttgcgacatccgccgattccaccagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cggcgccaacatacatcgccccctgccgcgatttgcgacatccgccgattccaccagaca 255
Query: 121 gagcaacccggattcgcgctgcgggttcgactaaggcggcacttgccggtgctgttggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gagcaacccggattcgcgctgcgggttcgactaaggcggcacttgccggtgctgttggcg 315
Query: 181 g-aggcgactggacatggcggcgcgtgggagagatctgtcgaaggtgaggaggaagagaa 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggaggcgactggacatggcggcgcgtgggagagatctgtcgaaggtgaggaggaagagaa 375
Query: 240 tgcgaggccgcgagttggtgagcttgagccggcgagtggccggggaagcgtgaatcggac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgcgaggccgcgagttggtgagcttgagccggcgagtggccggggaagcgtgaatcggac 435
Query: 300 ggcggaggtggtggctgcggcggcggtgacggtggtgatgggcgtcggtaaccgggtgat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ggcggaggtggtggctgcggcggcggtgacggtggtgatgggcgtcggtaaccgggtgat 495
Query: 360 gtataagctagcgttggttcctttgaagcagtaccctttctttctggctcagcttgctac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gtataagctagcgttggttcctttgaagcagtaccctttctttctggctcagcttgctac 555
Query: 420 tatcggatacgtaatagtatacttctctattttgtatatccggtaccgcacgggcattgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tatcggatacgtaatagtatacttctctattttgtatatccggtaccgcacgggcattgt 615
Query: 480 caccgatgagatgttatctgtgccaaaaactccatttctatttgttggtctcttggaggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 caccgatgagatgttatctgtgccaaaaactccatttctatttgttggtctcttggaggc 675
Query: 540 tctgggtgctgccacaggaatggcagc 566
|||||||||||||||||||||||||||
Sbjct: 676 tctgggtgctgccacaggaatggcagc 702
>gnl|LJGI|TC82050 similar to UniRef100_A7PI77 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 1093
Score = 194 bits (98), Expect = 9e-49
Identities = 175/205 (85%), Gaps = 18/205 (8%)
Strand = Plus / Plus
Query: 207 ggagagatctgtcgaaggtgaggaggaagagaatgcgaggccgcgagttggtgagcttga 266
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||
Sbjct: 95 ggagagatctgtcgaaggtgaggaggaagataatgcgaggccgcgacttggtgagctcga 154
Query: 267 gccggcgagtggccggggaagcgtgaatcggacggcggaggtggtggctgcggcggcggt 326
| ||| || |||||||| |||| |||||| |||||| ||||||
Sbjct: 155 gacggggaatggccgggaaagcttgaatcagacggc------------------ggcggt 196
Query: 327 gacggtggtgatgggcgtcggtaaccgggtgatgtataagctagcgttggttcctttgaa 386
||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 197 gacggtggtgatgggtgtcgggaacagggtgatgtataagctagcgttggttcctttgaa 256
Query: 387 gcagtaccctttctttctggctcag 411
|||||||||||||||||||||||||
Sbjct: 257 gcagtaccctttctttctggctcag 281
Score = 67.9 bits (34), Expect = 1e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 34 ggcgccgcctcaccgttcgtccacatccggcgccaacatacatcgccccc 83
|||||||||||||||||||||||| |||||||||| ||| || |||||||
Sbjct: 41 ggcgccgcctcaccgttcgtccacgtccggcgccagcatccagcgccccc 90
>gnl|LJGI|TC78630
Length = 726
Score = 71.9 bits (36), Expect = 9e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 212 gatctgtcgaaggtgaggaggaagagaatgcgaggc 247
||||||||||||||||||||||||||||||||||||
Sbjct: 140 gatctgtcgaaggtgaggaggaagagaatgcgaggc 175