Miyakogusa Predicted Gene
- Lj0g3v0262609.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0262609.1 Non Chatacterized Hit- tr|C0PH02|C0PH02_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,31.47,3e-18,seg,NULL,CUFF.17290.1
(1110 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73451 similar to UniRef100_A7PCG6 Cluster: Chromosome... 1273 0.0
gnl|LJGI|TC80853 similar to UniRef100_Q9SQJ4 Cluster: 2Cys-perox... 359 2e-98
gnl|LJGI|TC60313 similar to UniRef100_A7PCG6 Cluster: Chromosome... 278 7e-74
gnl|LJGI|TC65121 similar to UniRef100_Q9LPJ1 Cluster: F6N18.11; ... 109 4e-23
gnl|LJGI|AV764924 92 9e-18
>gnl|LJGI|TC73451 similar to UniRef100_A7PCG6 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 712
Score = 1273 bits (642), Expect = 0.0
Identities = 642/642 (100%)
Strand = Plus / Plus
Query: 1 atggcgacaacaccgaacaacaacaacccggtggctacgagaggaggaaccccaggtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atggcgacaacaccgaacaacaacaacccggtggctacgagaggaggaaccccaggtgtg 130
Query: 61 gcggtgcctgctgctaatccttctccgcctccgccgcccaaatcccaacgcggccataac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gcggtgcctgctgctaatccttctccgcctccgccgcccaaatcccaacgcggccataac 190
Query: 121 aagcccaagtgcaagcagtgtggcaatgtcgctcgttctaggtgcccttatgagtgttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aagcccaagtgcaagcagtgtggcaatgtcgctcgttctaggtgcccttatgagtgttgc 250
Query: 181 aagagttgctgtgccagaaatcaaaacccatgtcatattcatgtgttaaaagcaaattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aagagttgctgtgccagaaatcaaaacccatgtcatattcatgtgttaaaagcaaattca 310
Query: 241 actgttcctgaaaagacgccatcttctggtgctgccccacttgatcagcaatccttggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 actgttcctgaaaagacgccatcttctggtgctgccccacttgatcagcaatccttggaa 370
Query: 301 ctacctcattcaacaaatgctggtagagctgcatctcttcgacaactttccaatagtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctacctcattcaacaaatgctggtagagctgcatctcttcgacaactttccaatagtttt 430
Query: 361 gctcagttcaacaatttgcacctttcacttcgttcaaaaaagccactgacaagaaaggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gctcagttcaacaatttgcacctttcacttcgttcaaaaaagccactgacaagaaaggat 490
Query: 421 gctgaggctatcaacgagtggagatttgccaagttaaaggaatacaaggagcgaaacatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gctgaggctatcaacgagtggagatttgccaagttaaaggaatacaaggagcgaaacatc 550
Query: 481 gaagtagagaatgaagcttttgaccggtacatgcaaaatgtagatttgctggaagaagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gaagtagagaatgaagcttttgaccggtacatgcaaaatgtagatttgctggaagaagta 610
Query: 541 ttggctgtgcagtcttcagacgacaatgtgtcctctgcatcggaatctaatccggcttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttggctgtgcagtcttcagacgacaatgtgtcctctgcatcggaatctaatccggcttca 670
Query: 601 acggagaacaacgagacaatgatcccttggctaaaattgcag 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 acggagaacaacgagacaatgatcccttggctaaaattgcag 712
>gnl|LJGI|TC80853 similar to UniRef100_Q9SQJ4 Cluster: 2Cys-peroxiredoxin; n=1;
Brassica rapa|Rep: 2Cys-peroxiredoxin - Brassica
campestris (Field mustard), partial (10%)
Length = 444
Score = 359 bits (181), Expect = 2e-98
Identities = 253/265 (95%), Gaps = 9/265 (3%)
Strand = Plus / Plus
Query: 855 agaggatttgaagttgtgcttggagttgaagtcccagctttttgattcgagtgaaggctc 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaggatttgaagttgtgcttggagttgaagtcccagctttttgattcgagtgaaggctc 60
Query: 915 tggcattatggaaggtgaaggcagtgaaatgcttgagagtggaaaagctgctgagcctgc 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcattatggaaggtgaaggcagtgaaatgcttgagagtggaaaagctgctgagcctgc 120
Query: 975 aagggatgagacacctgcaataggattgaatt-att-cttta-ccaaaaatg-gttgtaa 1030
|||||||||||||||||||||||||||||||| ||| ||||| || |||||| |||||||
Sbjct: 121 aagggatgagacacctgcaataggattgaattgattgctttaccccaaaatgcgttgtaa 180
Query: 1031 ccaatgaaa-ttgat-caagaaactc-tcaaca-ttgtggacaagcacttttgttctctg 1086
||||||||| ||||| | |||||||| |||||| |||||||| |||||||||||||||||
Sbjct: 181 ccaatgaaacttgatcccagaaactcgtcaacacttgtggaccagcacttttgttctctg 240
Query: 1087 gagga-tgtagaggagttatgaggc 1110
||||| |||||||||||||||||||
Sbjct: 241 gaggactgtagaggagttatgaggc 265
>gnl|LJGI|TC60313 similar to UniRef100_A7PCG6 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 1269
Score = 278 bits (140), Expect = 7e-74
Identities = 373/450 (82%), Gaps = 3/450 (0%)
Strand = Plus / Plus
Query: 100 aaatcccaacgcggccataacaagcccaagtgcaagcagtgtggcaatgtcgctcgttct 159
||||||||||| || | |||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 96 aaatcccaacgtggactaaacaagccaaagtgcaaacagtgtggcaacgttgctcgctct 155
Query: 160 aggtgcccttatgagtgttgcaagagttgctgtgccagaaatcaaaacccatgtcatatt 219
||||| |||||||| |||||||| |||||| | |||||| |||| ||||||||||||
Sbjct: 156 aggtgtccttatgaacaatgcaagaggtgctgttcaagaaatgaaaatccatgtcatatt 215
Query: 220 catgtgttaaaagcaaattcaactgttcctgaaaagacgccatcttctggtgctgcccca 279
|||||| || | ||||||||| | || || ||| |||||||||| || ||| |||
Sbjct: 216 catgtg---aagacgaattcaactttgccggacaagctgccatcttcttttggtgctcca 272
Query: 280 cttgatcagcaatccttggaactacctcattcaacaaatgctggtagagctgcatctctt 339
||||||||||||||||| || | |||| ||| ||| ||| |||||| |||||| ||
Sbjct: 273 cttgatcagcaatccttagagacatctcaatcagcaactgcaagtagagttgcatcactc 332
Query: 340 cgacaactttccaatagttttgctcagttcaacaatttgcacctttcacttcgttcaaaa 399
|||||||||||||| | |||||| |||||||| |||||| || ||||||||||||||||
Sbjct: 333 cgacaactttccaacaattttgcgcagttcaataatttgaacatttcacttcgttcaaag 392
Query: 400 aagccactgacaagaaaggatgctgaggctatcaacgagtggagatttgccaagttaaag 459
||||||||||||| ||||||||||| |||| || || ||| || || |||||||||||
Sbjct: 393 aagccactgacaataaaggatgctgcaactataaatgaatggcgactttccaagttaaag 452
Query: 460 gaatacaaggagcgaaacatcgaagtagagaatgaagcttttgaccggtacatgcaaaat 519
||||||||||||||||| || || || || |||||| |||||||||| ||||||||||||
Sbjct: 453 gaatacaaggagcgaaatattgacgtggaaaatgaaacttttgaccgttacatgcaaaat 512
Query: 520 gtagatttgctggaagaagtattggctgtg 549
||||| | ||||||||||| ||| |||||
Sbjct: 513 gtagaactactggaagaagtgttgtctgtg 542
Score = 73.8 bits (37), Expect = 2e-12
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 798 tgaaaggttatcggctttaaatgatctcatggataaaattaacaaagcccgaactgaaga 857
|||||||||||| ||| ||| |||||| || |||||||| ||||||||| | | ||| ||
Sbjct: 803 tgaaaggttatctgctataagtgatcttattgataaaatcaacaaagccaggagtgagga 862
Query: 858 ggatttgaagttgtgcttggagttgaagtccca 890
||||||||| | ||||||||| ||||||||||
Sbjct: 863 ggatttgaactcttgcttggagatgaagtccca 895
>gnl|LJGI|TC65121 similar to UniRef100_Q9LPJ1 Cluster: F6N18.11; n=1; Arabidopsis
thaliana|Rep: F6N18.11 - Arabidopsis thaliana (Mouse-ear
cress), partial (13%)
Length = 844
Score = 109 bits (55), Expect = 4e-23
Identities = 162/197 (82%), Gaps = 3/197 (1%)
Strand = Plus / Plus
Query: 100 aaatcccaacgcggccataacaagcccaagtgcaagcagtgtggcaatgtcgctcgttct 159
||||||||||| || | |||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 105 aaatcccaacgtggactaaacaagccaaagtgcaaacagtgtggcaacgttgctcgctct 164
Query: 160 aggtgcccttatgagtgttgcaagagttgctgtgccagaaatcaaaacccatgtcatatt 219
||||| |||||||| |||||||| |||||| | |||||| |||| ||||||||||||
Sbjct: 165 aggtgtccttatgaacagtgcaagaggtgctgttcaagaaatgaaaatccatgtcatatt 224
Query: 220 catgtgttaaaagcaaattcaactgttcctgaaaagacgccatcttctggtgctgcccca 279
|||||| || | ||||||||| | || || ||| |||||||||| || ||| |||
Sbjct: 225 catgtg---aagacgaattcaactttgccggacaagctgccatcttcttttggtgctcca 281
Query: 280 cttgatcagcaatcctt 296
|||||||||||||||||
Sbjct: 282 cttgatcagcaatcctt 298
>gnl|LJGI|AV764924
Length = 252
Score = 91.7 bits (46), Expect = 9e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1026 tgtaaccaatgaaattgatcaagaaactctcaacattgtggacaagcacttttgttctct 1085
|||||||||| | ||||||||||||||||||| | |||||| |||||||||||||| | |
Sbjct: 252 tgtaaccaataanattgatcaagaaactctcacccttgtgggcaagcacttttgtttttt 193
Query: 1086 ggaggatgtagaggagttatgaggc 1110
|||||||||| |||| |||| ||||
Sbjct: 192 ggaggatgtaaaggaattataaggc 168