Miyakogusa Predicted Gene
- Lj0g3v0262429.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0262429.2 Non Chatacterized Hit- tr|I1KFB6|I1KFB6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25254
PE,88.25,0,seg,NULL; Homeodomain,Homeodomain; in StAR and
phosphatidylcholine transfer pro,Lipid-binding START;,CUFF.17282.2
(1605 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75175 homologue to UniRef100_A7PXH2 Cluster: Chromoso... 1088 0.0
gnl|LJGI|DC596654 similar to UniRef100_A7QUM2 Cluster: Chromosom... 1066 0.0
gnl|LJGI|TC77608 homologue to UniRef100_A7PXH2 Cluster: Chromoso... 500 e-140
gnl|LJGI|AV428630 homologue to UniRef100_O23045 Cluster: YUP8H12... 192 5e-48
gnl|LJGI|BP033878 homologue to UniRef100_UPI0000ECA327 Cluster: ... 90 5e-17
gnl|LJGI|TC70125 similar to UniRef100_A7PC25 Cluster: Chromosome... 76 8e-13
gnl|LJGI|TC71926 homologue to UniRef100_A7PXZ1 Cluster: Chromoso... 64 3e-09
gnl|LJGI|FS341512 similar to UniRef100_A7PXZ1 Cluster: Chromosom... 56 7e-07
>gnl|LJGI|TC75175 homologue to UniRef100_A7PXH2 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 831
Score = 1088 bits (549), Expect = 0.0
Identities = 555/558 (99%)
Strand = Plus / Plus
Query: 1 atgatgttccagccaaacctcatggaagctggtcagtttcaccctttagatatggctccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atgatgttccagccaaacctcatggaagctggtcagtttcaccctttagatatggctccc 333
Query: 61 aacacctcagagagcgacatccctcggctccgggaagatgagtttgacagcgccaccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aacacctcagagagcgacatccctcggctccgggaagatgagtttgacagcgccaccaag 393
Query: 121 tccggcagtgaaaaccatgaaggcgcatcgggcgaagaccaagagccacgtgccaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tccggcagtgaaaaccatgaaggcgcatcgggcgaagaccaagagccacgtgccaagaag 453
Query: 181 aagcgttaccatcgccacacccagcaccagatccaggaaatggaagcttttttcaaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aagcgttaccatcgccacacccagcaccagatccaggaaatggaagcttttttcaaggag 513
Query: 241 tgtcctcacccagatgacaagcaaaggaaggagctaagccgggagttagggttagagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgtcctcacccagatgacaagcaaaggaaggagctaagccgggagttagggttagagcca 573
Query: 301 ttgcaggttaagttttggtttcaaaacaagcgcactcagatgaagacccaacatgaacgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ttgcaggttaagttttggtttcaaaacaagcgcactcagatgaagacccaacatgaacgc 633
Query: 361 catgagaacacgtcgctgaggactgaaaatgagaagcttcgagcagataacatgaggtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 catgagaacacgtcgctgaggactgaaaatgagaagcttcgagcagataacatgaggtat 693
Query: 421 agggaagctcttagcaatgcatcttgtcctaattgtggcggaccaaccgctattggagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 694 agggaagctcttagcaatgcatcttgtcctaattgtggcggaccaaccgctatnggagaa 753
Query: 481 atgtcatttgatgaacatcacttgaggattgagaatgcacgtcttagagaagagattgaa 540
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 754 atgtcatttgatgaacatcacttgaggatngagaatgcacgtcttagagaagagatngaa 813
Query: 541 aggatttcatcaattgct 558
||||||||||||||||||
Sbjct: 814 aggatttcatcaattgct 831
>gnl|LJGI|DC596654 similar to UniRef100_A7QUM2 Cluster: Chromosome chr10 scaffold_179,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_179, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 567
Score = 1066 bits (538), Expect = 0.0
Identities = 550/554 (99%)
Strand = Plus / Plus
Query: 553 attgctgcaaagtacgtgggcaagccagtggtgaactattcccatctctcatctcctctc 612
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 13 attgctgcaaagtacgtgggcaagccagtgatgaactattcccatctctcgtctcctctc 72
Query: 613 cctcctcgtccgttagaactcggcgttggtggcggtttcggaagccagccaggaatcggt 672
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cctcctcgtccgctggaactcggcgttggtggcggtttcggaagccagccaggaatcggt 132
Query: 673 gtggacatgtatggaggtggagatattctgcggtcaatcaccgggcccacggaagctgat 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gtggacatgtatggaggtggagatattctgcggtcaatcaccgggcccacggaagctgat 192
Query: 733 aagccattcataatagagctagctgttgtggccatggaggagctcatagggatggcgcaa 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aagccattcataatagagctagctgttgtggccatggaggagctcatagggatggcgcaa 252
Query: 793 atgggtgatcctctctggttatctacactcgatggatctgatgctgtgctgaacgaggat 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atgggtgatcctctctggttatctacactcgatggatctgatgctgtgctgaacgaggat 312
Query: 853 gaatacatcagatcatttccaagagggattggaccgaaaccttctggtctcaaatgtgaa 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaatacatcagatcatttccaagagggattggaccgaaaccttctggtctcaaatgtgaa 372
Query: 913 gcttctcgtgaaactgctgttgttatcatgaaccatgtcagcctcgttgaaattctcatg 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gcttctcgtgaaactgctgttgttatcatgaaccatgtcagcctcgttgaaattctcatg 432
Query: 973 gatgtgaaccaatggtctacggttttctctgctatagtctcaagagcaatgactgttgaa 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gatgtgaaccaatggtctacggttttctctgctatagtctcaagagcaatgactgttgaa 492
Query: 1033 gtgttgtcaactggggtggccgggaactacaatggcgctttacaagtgatgacagctgag 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtgttgtcaactggggtggccgggaactacaatggcgctttacaagtgatgacagctgag 552
Query: 1093 ttgcatgtaccttc 1106
||||||||||||||
Sbjct: 553 ttgcatgtaccttc 566
>gnl|LJGI|TC77608 homologue to UniRef100_A7PXH2 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 698
Score = 500 bits (252), Expect = e-140
Identities = 351/384 (91%)
Strand = Plus / Plus
Query: 1200 tttgcgccctagtccttcaaccagatctagaagaaggccttctggttgcttaattcaaga 1259
|||||||||||||||||| | |||| ||||||||||||||||||||||||||| |||||
Sbjct: 1 tttgcgccctagtccttctgctagatgtagaagaaggccttctggttgcttaatccaaga 60
Query: 1260 aatgccaaatggctactcaaaggtgacatgggttgagcatgtagaagtggatgatagagg 1319
|||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||||
Sbjct: 61 aatgcccaatggctactcaaaggtcacctgggttgagcatgtagaagtggatgaaagagg 120
Query: 1320 tgttcacaatctttacaagcagcttgttgggtctggacaggcatttggtgcaaaacgttg 1379
|||||||||||| ||||||||||||||| | |||||||| ||||||||||||||||||||
Sbjct: 121 tgttcacaatctatacaagcagcttgttagctctggacatgcatttggtgcaaaacgttg 180
Query: 1380 ggttgcaaccttagatcgacaatgtgaaaggcttgctagtgccatggcaacaaacattcc 1439
| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 gatttcaaccttagatcgacaatgtgaaaggcttgctagtgccatggcaactaacattcc 240
Query: 1440 cacagtagatgttggagtgataacaagccaagaagggaggaagagcatgatgaaacttgc 1499
|||||| |||||||| |||||||||| |||||| ||||| ||||||||| ||||||| ||
Sbjct: 241 cacagttgatgttggcgtgataacaaaccaagatgggagaaagagcatgttgaaactggc 300
Query: 1500 tgagagaatggtgataagcttttgtgctggagtgagcgcttccactgctcattcatggac 1559
|||||| ||||| |||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 301 tgagaggatggttataagcttttgtgctggagtcagtgcttccactgctcacacatggac 360
Query: 1560 cacaatctctgggaccggtgctga 1583
|||||||| ||||| || |||||
Sbjct: 361 aacaatctccgggactggagctga 384
>gnl|LJGI|AV428630 homologue to UniRef100_O23045 Cluster: YUP8H12.16 protein; n=1;
Arabidopsis thaliana|Rep: YUP8H12.16 protein -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 342
Score = 192 bits (97), Expect = 5e-48
Identities = 200/233 (85%), Gaps = 6/233 (2%)
Strand = Plus / Plus
Query: 94 gaagatgagtttgacagcgccaccaagtccggcagtgaaaaccatgaagg---cgcatcg 150
||||| ||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||
Sbjct: 103 gaagacgagttcgacagtgccaccaagtccggcagcgaaaaccaagaaggtggcgcctct 162
Query: 151 ggcgaagaccaagagccacgtgc---caagaagaagcgttaccatcgccacacccagcac 207
|| | |||||| || || ||| | |||||| ||||| ||||| || ||||| ||||||
Sbjct: 163 ggaggagaccaggaccctcgtcctaacaagaaaaagcgctaccaccggcacactcagcac 222
Query: 208 cagatccaggaaatggaagcttttttcaaggagtgtcctcacccagatgacaagcaaagg 267
|||||||||||||||||| |||||||||||||||| || ||||| ||||||||||| |||
Sbjct: 223 cagatccaggaaatggaatcttttttcaaggagtgcccacaccctgatgacaagcagagg 282
Query: 268 aaggagctaagccgggagttagggttagagccattgcaggttaagttttggtt 320
|||||| | ||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 283 aaggagttgagcagggagttagggttagagccattgcaggtcaagttttggtt 335
>gnl|LJGI|BP033878 homologue to UniRef100_UPI0000ECA327 Cluster: Chromodomain
helicase-DNA-binding protein 5 (EC 3.6.1.-) (ATP-
dependent helicase CHD5), partial (0%)
Length = 546
Score = 89.7 bits (45), Expect = 5e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 1 atgatgttccagccaaacctcatggaagctggtcagtttcaccct 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atgatgttccagccaaacctcatggaagctggtcagtttcaccct 546
>gnl|LJGI|TC70125 similar to UniRef100_A7PC25 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 585
Score = 75.8 bits (38), Expect = 8e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 207 ccagatccaggaaatggaagcttttttcaaggagtgtcctcacccagatgacaagcaaag 266
||||||||| |||||||||||||| |||||||| ||||| ||||| ||||| ||||||||
Sbjct: 414 ccagatccaagaaatggaagctttgttcaaggaatgtccacacccggatgataagcaaag 473
Query: 267 ga 268
||
Sbjct: 474 ga 475
>gnl|LJGI|TC71926 homologue to UniRef100_A7PXZ1 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 737
Score = 63.9 bits (32), Expect = 3e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 223 gaagcttttttcaaggagtgtcctcacccagatgacaagcaaag 266
||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 690 gaagcgttgttcaaggagtgtcctcacccagatgagaagcaaag 733
>gnl|LJGI|FS341512 similar to UniRef100_A7PXZ1 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 808
Score = 56.0 bits (28), Expect = 7e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 232 ttcaaggagtgtcctcacccagatgacaagcaaagg 267
|||||||||||||||||||| ||||| |||||||||
Sbjct: 576 ttcaaggagtgtcctcacccggatgagaagcaaagg 611