Miyakogusa Predicted Gene
- Lj0g3v0262259.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0262259.2 tr|D7KF36|D7KF36_ARALL DNA binding protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470539
,38.89,0,FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type; Acyl-CoA
N-acyltransferases (Nat),Acyl-CoA N-acyltr,CUFF.17270.2
(1611 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75549 similar to UniRef100_A1S637 Cluster: Acetyltran... 674 0.0
gnl|LJGI|TC76386 homologue to UniRef100_A5CVW8 Cluster: 50S ribo... 377 e-103
gnl|LJGI|AV770689 similar to UniRef100_A6CRE5 Cluster: Shikimate... 194 1e-48
>gnl|LJGI|TC75549 similar to UniRef100_A1S637 Cluster: Acetyltransferase, GNAT family;
n=1; Shewanella amazonensis SB2B|Rep: Acetyltransferase,
GNAT family - Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B), partial (11%)
Length = 522
Score = 674 bits (340), Expect = 0.0
Identities = 349/352 (99%)
Strand = Plus / Plus
Query: 1260 gggccaaggaatttgccggtcattaatgaaggaaattgaatccttcctatgcagccttaa 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggccaaggaatttgccggtcattaatgaaggaaattgaatccttcctatgcagccttaa 60
Query: 1320 ggtcaaaaccttggttattccatctgttcctgagactgttgaaatgtggactcagaagtt 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtcaaaaccttggttattccatctgttcctgagactgttgaaatgtggactcagaagtt 120
Query: 1380 caatttcaatgaggtcaatgaggttaacagagagatgaagaaagaaatatacgctcataa 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caatttcaatgaggtcaatgaggttaacagagagatgaagaaagaaatatacgctcataa 180
Query: 1440 catcttgatgttccctcgaactatgattatgtacaaagatttgtttgtgagaatatcaga 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catcttgatgttccctcgaactatgattatgtacaaagatttgtttgtgagaatatcaga 240
Query: 1500 tgtatccaaggcaatgcagaatctcagaatgacgaggaaccaccacaagcacttcgattt 1559
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 tgtatccaaggccatgcagaatctcagaatgacgaggaaccaccaccagcacttcgattt 300
Query: 1560 gaagtccaggaaccacaaagggagccggctgagagaccacatcttgatttga 1611
|||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagtccaggaaccaccaagggagccggctgagagaccacatcttgatttga 352
>gnl|LJGI|TC76386 homologue to UniRef100_A5CVW8 Cluster: 50S ribosomal protein L19;
n=1; Candidatus Vesicomyosocius okutanii HA|Rep: 50S
ribosomal protein L19 - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA), partial (10%)
Length = 605
Score = 377 bits (190), Expect = e-103
Identities = 323/366 (88%), Gaps = 11/366 (3%)
Strand = Plus / Plus
Query: 1257 caggggccaaggaatttgccggtcattaatgaaggaaattgaatccttcctatgcagcct 1316
|||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 1 caggtgccaaggaatttgccggttgttaatgaaggaaattgaatctttcctatgcagcct 60
Query: 1317 taaggtcaaaaccttggttattccatctgttcctgagactgttgaaatgtggactcagaa 1376
| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 61 tcaggtcaaaaccttggttattccatctgttcctgagaatgttgaaatgtggacgcagaa 120
Query: 1377 gttcaatttcaatgaggtcaatgaggttaacagagagatgaagaaagaaatatacgctca 1436
||||| ||||||| |||||||||||||| | ||||||| ||||||||||||| | ||||
Sbjct: 121 gttcattttcaatttggtcaatgaggttagccgagagataaagaaagaaatatcctctca 180
Query: 1437 taacatcttgatgttccctcgaactatgattatgtacaaagatttgtttgtgagaatatc 1496
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 181 caacatcttgacgttccctcgaactatgattatgtacaaagatttgtgtgtgagaacatc 240
Query: 1497 agatg-tatccaaggc---------aatgcagaatctcagaatg-acgaggaaccaccac 1545
||||| |||||||||| | | ||||||||||||| |||||||||||| ||
Sbjct: 241 agatgttatccaaggcgcagacgatcaagttgaatctcagaatgaacgaggaaccactac 300
Query: 1546 aagcacttcgatttgaagtccaggaaccacaaagggagccggctgagagaccacatcttg 1605
|||||||| | ||||||||| ||||||| |||||||| |||||||||| |||||||||
Sbjct: 301 tagcacttcaaactgaagtccatgaaccaccaagggagcaggctgagagatcacatcttg 360
Query: 1606 atttga 1611
||||||
Sbjct: 361 atttga 366
>gnl|LJGI|AV770689 similar to UniRef100_A6CRE5 Cluster: Shikimate kinase; n=1;
Bacillus sp. SG-1|Rep: Shikimate kinase - Bacillus sp.
SG-1, partial (9%)
Length = 461
Score = 194 bits (98), Expect = 1e-48
Identities = 122/130 (93%)
Strand = Plus / Plus
Query: 3 gcagcacagagtcatggacaaggtggaaaaggtcataggcagggtgggcatggtggtgga 62
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 131 gcagcacagagtcatggacaaggtggaaaaggtcataggcatggtgggcatggtggtgga 190
Query: 63 caggggggacaaaggggtaggcatggtacaaagagtcctggatctcagcaaatggaagcc 122
|||| |||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 191 caggagggacaaaggtgtaggcatggcacaaagagtcctgcatctcagcaaagggaagct 250
Query: 123 gaggggaaaa 132
|| |||||||
Sbjct: 251 gacgggaaaa 260
Score = 194 bits (98), Expect = 1e-48
Identities = 113/118 (95%)
Strand = Plus / Plus
Query: 190 aggagaggttcacctttacctctacaaggaaggtcatgtcaaagaaccattctgtcatgg 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aggagaggttcacctttacctctacaaggaaggtcatgtcaaagaaccattctgtcatgg 403
Query: 250 ttgattgatcgtgagggtattaaagaatttgaacaagtgggctatttttataggtctg 307
||||| |||||||||| ||||||||||||||||||||||| |||||| ||| ||||||
Sbjct: 404 ttgatcgatcgtgaggttattaaagaatttgaacaagtggactatttgtatgggtctg 461