Miyakogusa Predicted Gene

Lj0g3v0261909.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0261909.1 Non Chatacterized Hit- tr|B9SDQ1|B9SDQ1_RICCO
Ubiquitin carboxyl-terminal hydrolase, putative
OS=Ric,56.43,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.17233.1
         (948 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW596856 similar to UniRef100_A7Q028 Cluster: Chromosom...   242   3e-63

>gnl|LJGI|BW596856 similar to UniRef100_A7Q028 Cluster: Chromosome chr8 scaffold_41,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_41, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 482

 Score =  242 bits (122), Expect = 3e-63
 Identities = 122/122 (100%)
 Strand = Plus / Plus

                                                                       
Query: 827 atgaaggagagactttagctaaggtgaaggtgaagatccagagtaaattgcatgttccgg 886
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgaaggagagactttagctaaggtgaaggtgaagatccagagtaaattgcatgttccgg 60

                                                                       
Query: 887 ctaaggattttgacaagtggaagtttgcatttctctcgctggatgatccaaactatcttc 946
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctaaggattttgacaagtggaagtttgcatttctctcgctggatgatccaaactatcttc 120

             
Query: 947 aa 948
           ||
Sbjct: 121 aa 122