Miyakogusa Predicted Gene

Lj0g3v0261799.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0261799.1 Non Chatacterized Hit- tr|I1J608|I1J608_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,26.49,2e-18,seg,NULL;
PPR: pentatricopeptide repeat domain,Pentatricopeptide repeat;
SUBFAMILY NOT NAMED,NULL; F,CUFF.17224.1
         (1713 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS346680 weakly similar to UniRef100_A7PJG0 Cluster: Ch...   430   e-119
gnl|LJGI|TC75494                                                      133   4e-30

>gnl|LJGI|FS346680 weakly similar to UniRef100_A7PJG0 Cluster: Chromosome chr12
            scaffold_18, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 589

 Score =  430 bits (217), Expect = e-119
 Identities = 403/465 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1246 attatattggatggactatttaaatgtcatttttatcccgaggcagtatcattgtatagg 1305
            ||||| |||||||| ||||| |||||  |||||||| | |||||| ||||||| | ||||
Sbjct: 588  attattttggatggcctattcaaatgcaatttttattcagaggcaatatcattatttagg 529

                                                                        
Query: 1306 gaattggaaaagatgaatttggatcgccatattacaatttatagtattatgcttgacggg 1365
            | ||||||| |||||||||||||||| ||||||  ||||||||||||| | ||||| |||
Sbjct: 528  gcattggaacagatgaatttggatcgtcatattttaatttatagtattgtacttgatggg 469

                                                                        
Query: 1366 ttgtgcagttatggaagactgaaagatgcacgggaattcttttctggtctgcaagctaaa 1425
             ||||||||| ||||| |||||| ||||| |||||| |||||||| |||| | |||||||
Sbjct: 468  atgtgcagttttggaaaactgaatgatgcgcgggaactcttttcttgtctaccagctaaa 409

                                                                        
Query: 1426 gggttgaaaattgatgtttttacttataccataatggttcaaggtctatgtagagaagga 1485
            || ||||||||| |||||| ||| ||||| |||||| || |||| ||||||| |||||||
Sbjct: 408  ggtttgaaaattaatgtttatacatatacaataatgattaaaggcctatgtaaagaagga 349

                                                                        
Query: 1486 ttattggatgatgcagaacagttactgatggatatggaagagaagggctgtccccctaat 1545
            |||||||||||||| ||| | ||||||||| ||||||||||||| |||||||||||||||
Sbjct: 348  ttattggatgatgctgaagacttactgatgaatatggaagagaatggctgtccccctaat 289

                                                                        
Query: 1546 gattgtacttataatctttttgtacaaggattgctgcgaagaggtgatatttcacggtcg 1605
            | ||||||||||||| |||| || |||||||| ||||||| |  |||||||| | |||| 
Sbjct: 288  gcttgtacttataatgttttggttcaaggattactgcgaatatatgatattttaaggtca 229

                                                                        
Query: 1606 gaaaaataccttcaactaatgaaaggcaaaggattttctgcggatgctaccaccacagaa 1665
            | |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 228  gcaaaataccttcaactaatgaaaggcaaaggtttttctgcagatgctaccactacagaa 169

                                                         
Query: 1666 ttgcttatcaacttcttctctggtaataaagcagataatacattt 1710
            |||||||||| || ||||||||||| ||||| ||| ||| |||||
Sbjct: 168  ttgcttatcagctccttctctggtattaaaggagaaaatgcattt 124


>gnl|LJGI|TC75494 
          Length = 745

 Score =  133 bits (67), Expect = 4e-30
 Identities = 295/371 (79%)
 Strand = Plus / Plus

                                                                       
Query: 116 agttattgagttccatgagagatctcaaaactgtcgatgctgctgtcgatttcttcaaca 175
           ||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 374 agttattgaattccatgagagatctcaaaactgtcgatgctgctttggatttcttcaaca 433

                                                                       
Query: 176 aaatggcagcaatcaatcctttccccaatatcaaagaattcaccgttttgatcaacctcg 235
           ||||||  ||||| || ||||||||   | ||||||| ||||    ||||  || | | |
Sbjct: 434 aaatggttgcaatgaaccctttcccatctgtcaaagacttcaattgtttgtgcagcattg 493

                                                                       
Query: 236 ttgtgaaaatgaaacactacaccactgccatttccttagtcaaacgcatgcattcactgg 295
           ||||||| ||||| || |||||||| ||||||||  || ||||||| ||||||||  |||
Sbjct: 494 ttgtgaagatgaagcattacaccaccgccatttcgctaatcaaacgaatgcattcgttgg 553

                                                                       
Query: 296 gtatcgaagctgattcgtttaccttcaccattgtcatcaattgtctgtgtcgattgagcc 355
           |  |  ||  |||||| |  ||| |||  |||||| |||||||||| || |||||||  |
Sbjct: 554 gggtgaaaattgattcatggaccctcaatattgtcgtcaattgtctctgccgattgaagc 613

                                                                       
Query: 356 gcaccgatttagggttttgtgttttagggcttatgttcaaaatggggttggaacctgata 415
           | || |  || ||||| |   |||||||||||||||| ||||| || ||||| ||     
Sbjct: 614 gaacggtattcgggttatcgattttagggcttatgtttaaaattggtttggagccgacgg 673

                                                                       
Query: 416 ttgtgactcttactaccattgttaacgggctttgcgcggaagggaatgtggaacaagcat 475
           | |||||  |||  |||||||||||||||||||| | ||| || ||||||||||||||||
Sbjct: 674 tagtgacgattaacaccattgttaacgggctttgtgtggagggcaatgtggaacaagcat 733

                      
Query: 476 tagggttagct 486
           | |||||||||
Sbjct: 734 tggggttagct 744