Miyakogusa Predicted Gene
- Lj0g3v0261769.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0261769.1 Non Chatacterized Hit- tr|A5AD05|A5AD05_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.75,0.01,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; CAD & PB1 domains,NULL; PB1 domain,Phox/B,CUFF.17221.1
(1578 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65407 similar to UniRef100_Q0JQT8 Cluster: Os01g01392... 1338 0.0
gnl|LJGI|TC72371 similar to UniRef100_Q9ZU48 Cluster: Expressed ... 212 5e-54
gnl|LJGI|TC72143 weakly similar to UniRef100_A7P3E4 Cluster: Chr... 117 2e-25
gnl|LJGI|TC67236 similar to UniRef100_Q9ZU48 Cluster: Expressed ... 105 8e-22
gnl|LJGI|TC73547 homologue to UniRef100_A7Q6F3 Cluster: Chromoso... 103 3e-21
>gnl|LJGI|TC65407 similar to UniRef100_Q0JQT8 Cluster: Os01g0139200 protein; n=2;
Oryza sativa Japonica Group|Rep: Os01g0139200 protein -
Oryza sativa subsp. japonica (Rice), partial (21%)
Length = 1185
Score = 1338 bits (675), Expect = 0.0
Identities = 675/675 (100%)
Strand = Plus / Plus
Query: 1 atggaggcgcaacccactcctccgccgatctacccagactccacaaactcctccccccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atggaggcgcaacccactcctccgccgatctacccagactccacaaactcctccccccgc 107
Query: 61 tcccgcaacaccgactcatgggacgacccctacccttctcctgcagccaccaccaccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tcccgcaacaccgactcatgggacgacccctacccttctcctgcagccaccaccaccaag 167
Query: 121 ctccgcctgatgtgcagctacggcggccacatcgtcccccgccctcacgacaagtccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ctccgcctgatgtgcagctacggcggccacatcgtcccccgccctcacgacaagtccctc 227
Query: 181 tgctacgtcggcggcgacacccgcatcctcgtggtggatcgtaccacctccctctctgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tgctacgtcggcggcgacacccgcatcctcgtggtggatcgtaccacctccctctctgac 287
Query: 241 ctctcagcgcgactctccaagacgctcctcaagggtcgaccgttcgttctcaagtaccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctctcagcgcgactctccaagacgctcctcaagggtcgaccgttcgttctcaagtaccag 347
Query: 301 ctcccgaacgaggaccttgattccctcgtctccgttaccaccgatgaagacctcgagaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ctcccgaacgaggaccttgattccctcgtctccgttaccaccgatgaagacctcgagaac 407
Query: 361 atgatcgacgagtatctcaaccggaacccctcacgaattcgcctctttctgttcgaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atgatcgacgagtatctcaaccggaacccctcacgaattcgcctctttctgttcgaggct 467
Query: 421 gcgccgggaacacccaagtcggaggagtggttcatgagcgcgttgagcagaggtatgccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gcgccgggaacacccaagtcggaggagtggttcatgagcgcgttgagcagaggtatgccg 527
Query: 481 gattctgcttccgtcaattccctcctcgggctggatgatgacgctgctgctgcgccggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gattctgcttccgtcaattccctcctcgggctggatgatgacgctgctgctgcgccggcg 587
Query: 541 catgggaagaattcgaagcaggaggttcagtcggtgccggattctcctatgctggggacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 catgggaagaattcgaagcaggaggttcagtcggtgccggattctcctatgctggggacg 647
Query: 601 aattcgtcttttggctcttcttcttcgtcgccgtcggcggtgaatttgccgcagattaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aattcgtcttttggctcttcttcttcgtcgccgtcggcggtgaatttgccgcagattaag 707
Query: 661 gttcgtgtggaggaa 675
|||||||||||||||
Sbjct: 708 gttcgtgtggaggaa 722
Score = 864 bits (436), Expect = 0.0
Identities = 436/436 (100%)
Strand = Plus / Plus
Query: 703 aatagggtgcaggatcagaagggggtgggaattgaggagcagtttgctcaattgggtgtt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 aatagggtgcaggatcagaagggggtgggaattgaggagcagtttgctcaattgggtgtt 809
Query: 763 ggtggggcgaggcagaagccaggtgaggggtttgctgcgctctcttcgccaccagcggcg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ggtggggcgaggcagaagccaggtgaggggtttgctgcgctctcttcgccaccagcggcg 869
Query: 823 gttgcggctgttgtctccgatgaagagagatcggagcatggggtccctgtggggcatagg 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 gttgcggctgttgtctccgatgaagagagatcggagcatggggtccctgtggggcatagg 929
Query: 883 caaccacaacagcaggttcagactcaaactacacagacacaggtgcagtcacaatctcag 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 caaccacaacagcaggttcagactcaaactacacagacacaggtgcagtcacaatctcag 989
Query: 943 ggtcaggttccccaatttcagcagaattcaactggttttgttgatttgacttcccctaat 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 ggtcaggttccccaatttcagcagaattcaactggttttgttgatttgacttcccctaat 1049
Query: 1003 tcagttgcaagtgataatagttttgtaaatgcgatgccatttctgaaacctgtgatctat 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 tcagttgcaagtgataatagttttgtaaatgcgatgccatttctgaaacctgtgatctat 1109
Query: 1063 caagaccaagttcatattcaatctggaacttcacgggttcatactcctccccctgttgat 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 caagaccaagttcatattcaatctggaacttcacgggttcatactcctccccctgttgat 1169
Query: 1123 cccaatttgtctgatc 1138
||||||||||||||||
Sbjct: 1170 cccaatttgtctgatc 1185
>gnl|LJGI|TC72371 similar to UniRef100_Q9ZU48 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (28%)
Length = 1512
Score = 212 bits (107), Expect = 5e-54
Identities = 271/328 (82%), Gaps = 12/328 (3%)
Strand = Plus / Plus
Query: 47 actcctccccccgctcccgcaacaccgactcatgggacgacccctacccttctcctgcag 106
|||||||||||||||| |||||||||||||||||||||||||||| |||| | | ||
Sbjct: 175 actcctccccccgctctcgcaacaccgactcatgggacgaccccttccctccgacgtca- 233
Query: 107 ccaccaccaccaagctccgcctgatgtgcagctacggcggccacatcgtcccccgccctc 166
|||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 234 -----------aagctccgtctcatgtgcagctacggcggccacatcgtcccccgccctc 282
Query: 167 acgacaagtccctctgctacgtcggcggcgacacccgcatcctcgtggtggatcgtacca 226
|||||||||| |||||||||||||||||||| |||||||| | || || || || |||
Sbjct: 283 acgacaagtctctctgctacgtcggcggcgatacccgcatagtggttgttgaacgcgcca 342
Query: 227 cctccctctctgacctctcagcgcgactctccaagacgctcctcaagggtcgaccgttcg 286
|||| ||| ||||| |||| |||| |||||||| ||| ||||| | || |||| |||
Sbjct: 343 cctcactcgctgacatctccacgcgcctctccaaaacgttcctcgacggaagacccttca 402
Query: 287 ttctcaagtaccagctcccgaacgaggaccttgattccctcgtctccgttaccaccgatg 346
||| ||||||||||| |||||||| ||||| ||||| ||| ||||||| |||||||| |
Sbjct: 403 ctctgaagtaccagcttccgaacgaagacctcgattctctcatctccgtcaccaccgacg 462
Query: 347 aagacctcgagaacatgatcgacgagta 374
| ||||||||||| |||||||| |||||
Sbjct: 463 aggacctcgagaatatgatcgatgagta 490
Score = 73.8 bits (37), Expect = 3e-12
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 984 tgatttgacttcccctaattcagttgcaagtgataatagttttgtaaatgcgatgccatt 1043
||||||| |||| ||| |||||||| ||||||||| |||| ||| ||||| ||| |
Sbjct: 1340 tgatttgccttctcctgattcagtttcaagtgatagtagtcttgcgaatgcaatgtcgcg 1399
Query: 1044 tctgaaacctgtgatctatcaagaccaagttcatattcaatctggaacttcacgggttca 1103
|| || ||||||||||||||||| ||||||| ||||||||||||||| || ||||||
Sbjct: 1400 tcaaaagcctgtgatctatcaagagcaagttctgattcaatctggaactacaagggttcc 1459
Query: 1104 tactc 1108
|||||
Sbjct: 1460 tactc 1464
Score = 69.9 bits (35), Expect = 5e-11
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 547 aagaattcgaagcaggaggttcagtcggtgccggattctcctatgctggggacgaattcg 606
||||||||||||||||| ||| ||| ||||||||||| |||||||||| ||| |||
Sbjct: 822 aagaattcgaagcaggatgtttcgtctgtgccggattcgcctatgctggagacttcatcg 881
Query: 607 tcttttggctcttcttcttcgtcgccg 633
|||||||| ||| |||| |||||||||
Sbjct: 882 tcttttgggtctacttcctcgtcgccg 908
Score = 67.9 bits (34), Expect = 2e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 714 ggatcagaagggggtgggaattgaggagcagtttgctcaattgggtgttg 763
||||||||||| | |||| |||||||||||||||||||| ||||||||||
Sbjct: 983 ggatcagaaggtgctggggattgaggagcagtttgctcagttgggtgttg 1032
Score = 56.0 bits (28), Expect = 7e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 836 tctccgatgaagagagatcggagcatggggtccctgtggg 875
|||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 1186 tctccgatgatgagagatcggatcatggggtgcctgtggg 1225
>gnl|LJGI|TC72143 weakly similar to UniRef100_A7P3E4 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 518
Score = 117 bits (59), Expect = 2e-25
Identities = 113/131 (86%)
Strand = Plus / Minus
Query: 1414 agacaggcccaagcatataacttgccggcgcagcatgctaatgttggtgaatctgccaca 1473
|||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 131 agacaggcccaagcatataacttgtcagcgcagcatgctaatgtaggtgaatctgccaca 72
Query: 1474 aatatctctcctagtgctgctccatcatctgctgcttataatcccctgagagatgctccc 1533
| ||| ||| ||||| |||||||||||| | ||||| || | ||| || ||| ||||
Sbjct: 71 actatatcttgaagtgcggctccatcatcttccgcttacaacctcctaggaaatggtccc 12
Query: 1534 ttgcctcagtt 1544
|||||||||||
Sbjct: 11 ttgcctcagtt 1
Score = 73.8 bits (37), Expect = 3e-12
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 1047 gaaacctgtgatctatcaagaccaagttcatattcaatctggaac 1091
||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 325 gaaacctgtaatctatcaagaccaagttcaaattcaatctggaac 281
Score = 67.9 bits (34), Expect = 2e-10
Identities = 67/76 (88%), Gaps = 4/76 (5%)
Strand = Plus / Minus
Query: 1488 tgctgctccatcatctgctgcttat---aatcccctgagagatgctcccttgcctcagtt 1544
|||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||
Sbjct: 240 tgctgctccatcatctgctgtttataacaattccctgagaaatgttcccttgcctcagtt 181
Query: 1545 tgttcagattcctact 1560
||| |||||||||||
Sbjct: 180 agtt-agattcctact 166
>gnl|LJGI|TC67236 similar to UniRef100_Q9ZU48 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (23%)
Length = 954
Score = 105 bits (53), Expect = 8e-22
Identities = 109/130 (83%), Gaps = 12/130 (9%)
Strand = Plus / Plus
Query: 47 actcctccccccgctcccgcaacaccgactcatgggacgacccctacccttctcctgcag 106
|||||||||||||||| |||||||||||||||||||||||||||| |||| | | ||
Sbjct: 154 actcctccccccgctctcgcaacaccgactcatgggacgaccccttccctccgacgtca- 212
Query: 107 ccaccaccaccaagctccgcctgatgtgcagctacggcggccacatcgtcccccgccctc 166
|||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 213 -----------aagctccgtctcatgtgcagctacggcggccacatcgtcccccgccctc 261
Query: 167 acgacaagtc 176
||||||||||
Sbjct: 262 acgacaagtc 271
Score = 73.8 bits (37), Expect = 3e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 711 gcaggatcagaagggggtgggaattgaggagcagtttgctcaattgggtgttg 763
|||||||||||||| | |||| |||||||||||||||||||| ||||||||||
Sbjct: 457 gcaggatcagaaggtgctggggattgaggagcagtttgctcagttgggtgttg 509
Score = 73.8 bits (37), Expect = 3e-12
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 984 tgatttgacttcccctaattcagttgcaagtgataatagttttgtaaatgcgatgccatt 1043
||||||| |||| ||| |||||||| ||||||||| |||| ||| ||||| ||| |
Sbjct: 817 tgatttgccttctcctgattcagtttcaagtgatagtagtcttgcgaatgcaatgtcgcg 876
Query: 1044 tctgaaacctgtgatctatcaagaccaagttcatattcaatctggaacttcacgggttca 1103
|| || ||||||||||||||||| ||||||| ||||||||||||||| || ||||||
Sbjct: 877 tcaaaagcctgtgatctatcaagagcaagttctgattcaatctggaactacaagggttcc 936
Query: 1104 tactc 1108
|||||
Sbjct: 937 tactc 941
Score = 69.9 bits (35), Expect = 5e-11
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 547 aagaattcgaagcaggaggttcagtcggtgccggattctcctatgctggggacgaattcg 606
||||||||||||||||| ||| ||| ||||||||||| |||||||||| ||| |||
Sbjct: 299 aagaattcgaagcaggatgtttcgtctgtgccggattcgcctatgctggagacttcatcg 358
Query: 607 tcttttggctcttcttcttcgtcgccg 633
|||||||| ||| |||| |||||||||
Sbjct: 359 tcttttgggtctacttcctcgtcgccg 385
Score = 56.0 bits (28), Expect = 7e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 836 tctccgatgaagagagatcggagcatggggtccctgtggg 875
|||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 663 tctccgatgatgagagatcggatcatggggtgcctgtggg 702
>gnl|LJGI|TC73547 homologue to UniRef100_A7Q6F3 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 733
Score = 103 bits (52), Expect = 3e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 1359 tccccagcatcaccatctggttgatcaacaataccaagtttattatgtgcctgcgagaca 1418
||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 201 tccccggcatcaccatctggttgatcaacaataccaggtttattatgttcctgcgagaca 142
Query: 1419 ggcc 1422
||||
Sbjct: 141 ggcc 138