Miyakogusa Predicted Gene
- Lj0g3v0261749.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0261749.1 Non Chatacterized Hit- tr|K3Y6I6|K3Y6I6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009827,40.44,2e-19,AA_permease_2,NULL; AMINO ACID
PERMEASE-RELATED,NULL; AMINO ACID TRANSPORTER,Amino acid/polyamine
tr,gene.g20344.t1.1
(438 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73262 similar to UniRef100_A7P3E9 Cluster: Chromosome... 781 0.0
gnl|LJGI|TC74330 similar to UniRef100_A7P3E9 Cluster: Chromosome... 494 e-139
gnl|LJGI|BW595383 similar to UniRef100_A7P3E9 Cluster: Chromosom... 274 4e-73
gnl|LJGI|TC66074 similar to UniRef100_A7P3E9 Cluster: Chromosome... 113 9e-25
gnl|LJGI|TC58500 similar to UniRef100_A7P3E9 Cluster: Chromosome... 100 1e-20
gnl|LJGI|BW599409 similar to UniRef100_Q5FV40 Cluster: At2g01170... 52 3e-06
>gnl|LJGI|TC73262 similar to UniRef100_A7P3E9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 514
Score = 781 bits (394), Expect = 0.0
Identities = 410/414 (99%), Gaps = 1/414 (0%)
Strand = Plus / Plus
Query: 26 cggaaagggctagtgtgaagtttgttttcacttatttcaatactgataatggtgatggaa 85
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 cggaaagggctagtgtgaagtttgttttcacttatttcgatactgataatggtgatggaa 60
Query: 86 tcaacagcag-atgctatatttttctgcttggacttttaatgagtcaatataccctgact 144
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccacagcaggatgctatatttttctgcttggacttttaatgagtcaatataccctgact 120
Query: 145 gggtatgatgcatcagctcatatgacagaggaaacgaaggatgctgagagaaatggacca 204
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gggtatgatgcatcagctcatatgacagaggaaacgaaggatgctgagagaaatggaccc 180
Query: 205 aaaggaattattagttctattgggttatctattattgttggatggtgttacatactaggc 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaggaattattagttctattgggttatctattattgttggatggtgttacatactaggc 240
Query: 265 atttcctttgcagttactgatatccctggccttttaagtgatgataatgaggctggtggg 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atttcctttgcagttactgatatccctggccttttaagtgatgataatgaggctggtggg 300
Query: 325 tatgcaattgctgtgagatattttatctggcattcaagagtagatatggcaatggagttg 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatgcaattgctgtgagatattttatctggcattcaagagtagatatggcaatggagttg 360
Query: 385 gtggtattgtttgcttgggaatcgttgctgttgccgtatttttctgtggcatga 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtggtattgtttgcttgggaatcgttgctgttgccgtatttttctgtggcatga 414
>gnl|LJGI|TC74330 similar to UniRef100_A7P3E9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 570
Score = 494 bits (249), Expect = e-139
Identities = 269/273 (98%), Gaps = 2/273 (0%)
Strand = Plus / Plus
Query: 168 gacagaggaaacgaaggatgctgagagaaatggaccaaaaggaattattagttctattgg 227
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 196 gacagaggaaacgaaggatgctgagagaaatggacctaaaggaattattagttctattgg 255
Query: 228 gttatctattattgttggatggtgttacatactaggcatttcctttgcagttactgatat 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gttatctattattgttggatggtgttacatactaggcatttcctttgcagttactgatat 315
Query: 288 -ccctggccttttaagtgatgataatgaggctggtgggtatgcaatt-gctgtgagatat 345
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 316 gccctggccttttaagtgatgataatgaggctggtgggtatgcaattcgctgtgagatat 375
Query: 346 tttatctggcattcaagagtagatatggcaatggagttggtggtattgtttgcttgggaa 405
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tttatctggcattcacgagtagatatggcaatggagttggtggtattgtttgcttgggaa 435
Query: 406 tcgttgctgttgccgtatttttctgtggcatga 438
|||||||||||||||||||||||||||||||||
Sbjct: 436 tcgttgctgttgccgtatttttctgtggcatga 468
Score = 163 bits (82), Expect = 1e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 87 caacagcagatgctatatttttctgcttggacttttaatgagtcaatataccctgactgg 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caacagcagatgctatatttttctgcttggacttttaatgagtcaatataccctgactgg 60
Query: 147 gtatgatgcatcagctcatatg 168
||||||||||||||||||||||
Sbjct: 61 gtatgatgcatcagctcatatg 82
>gnl|LJGI|BW595383 similar to UniRef100_A7P3E9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 466
Score = 274 bits (138), Expect = 4e-73
Identities = 273/317 (86%), Gaps = 2/317 (0%)
Strand = Plus / Plus
Query: 122 taatgagtcaatataccctgactgggtatgatgcatcagctcatatgacagaggaaacga 181
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
Sbjct: 17 taatgagtcaatataccctaaccgggtatgatgcatcagctcatatgacagaggaaacca 76
Query: 182 aggatgctgagagaaatggaccaaaaggaattattagttctattgggttatctattattg 241
| |||||||| ||||||||||||||||| ||||| || ||| |||| ||||||||||||
Sbjct: 77 aagatgctgatagaaatggaccaaaaggcattataagctctgttggaatatctattattg 136
Query: 242 ttggatggtgttacatactaggcatttcctttgcagttactgatatccctggccttttaa 301
|||||||| | ||||||||||||||| | || ||||| ||||| ||||| |||||| |
Sbjct: 137 ttggatgggggtacatactaggcattactttcgcagtcactgacatcccataccttttga 196
Query: 302 gtgatgataatgaggctggtgggtatgcaattgctgtgagatattttatctggcattcaa 361
||| ||||||| |||||||| ||||| || || ||| ||||||||| ||||||| ||
Sbjct: 197 atgaaaataatgatgctggtggatatgccatagc--tgaaatattttatatggcatttaa 254
Query: 362 gagtagatatggcaatggagttggtggtattgtttgcttgggaatcgttgctgttgccgt 421
||| ||||||||| ||||| |||| |||||| ||||||||| ||| |||||||||||| |
Sbjct: 255 gagaagatatggccatggaattgggggtattatttgcttggcaattgttgctgttgccat 314
Query: 422 atttttctgtggcatga 438
||||||||||| ||||
Sbjct: 315 ctttttctgtggtatga 331
>gnl|LJGI|TC66074 similar to UniRef100_A7P3E9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 790
Score = 113 bits (57), Expect = 9e-25
Identities = 153/184 (83%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 255 catactaggcatttcctttgcagttactgatatccctggccttttaagtgatgataatga 314
||||||||||||| | || ||||| ||||| ||||| |||||| | ||| |||||||
Sbjct: 2 catactaggcattactttcgcagtcactgacatcccataccttttgaatgaaaataatga 61
Query: 315 ggctggtgggtatgcaattgctgtgagatattttatctggcattcaagagtagatatggc 374
|||||||| ||||| || |||| | ||||||||| ||||||| ||||| |||||||||
Sbjct: 62 tgctggtggatatgccatagctg--aaatattttatatggcatttaagagaagatatggc 119
Query: 375 aatggagttggtggtattgtttgcttgggaatcgttgctgttgccgtatttttctgtggc 434
||||| |||| |||||| ||||||||| ||| |||||||||||| | |||||||||||
Sbjct: 120 catggaattgggggtattatttgcttggcaattgttgctgttgccatctttttctgtggt 179
Query: 435 atga 438
||||
Sbjct: 180 atga 183
>gnl|LJGI|TC58500 similar to UniRef100_A7P3E9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 821
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 9 cattccatctgttgcaacggaaagggctagtgtgaagtttgttttcacttatttcaatac 68
||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 754 cattccatcggttgcaacggaaagggctagtgccaagtttgttttcactcatttcaatac 813
Query: 69 tgataa 74
||||||
Sbjct: 814 tgataa 819
>gnl|LJGI|BW599409 similar to UniRef100_Q5FV40 Cluster: At2g01170; n=2; Arabidopsis
thaliana|Rep: At2g01170 - Arabidopsis thaliana
(Mouse-ear cress), partial (13%)
Length = 478
Score = 52.0 bits (26), Expect = 3e-06
Identities = 81/98 (82%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 342 atattttatctggcattcaagagtagatatggcaatggagttggtggtattgtttgct-t 400
||||||||| ||||||| ||| |||||||| ||||| |||| |||||| |||||| |
Sbjct: 312 atattttatatggcatttgggaggggatatggccatggaattgggggtattatttgctat 371
Query: 401 gggaatcgttgctgttgccgtatttttctgtggcatga 438
| ||| |||||||||||| | ||||||||||| ||||
Sbjct: 372 gacaattgttgctgttgccatctttttctgtggtatga 409